Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2795 ATGACAAATGTTGACACCTTATCCTGTGGATTTAGATTCCACCCAACAGATGATGAACTCATAGATCACTACCTATGTCCAAAGACTCTTAATAGCGACTTCGATCCCATAGCAGTAGCTGAGGTCGACCTGAACAGAGTTGAACCATGGGATCTTCCCAGTAGAGCCAAAATGGGGGAGAACGAACTGTACTTTTTCAGCATAAGAGACAAGAAATACCCAACTGGTTCCAGAACAAACAGAGCCACTGAAGCTGGTTACTGGAAAGCCACTGGCAAAGACAAGGATGTTCTGAGAGCTCATAAGCTTCTCATTGGGATGAAGAAAACTCTGGTTTTCTACTTGGGAAGAGCTCCTAGAGGTGAAAAGACCAACTGGGTCATGCATGAGTACAGACTTGATCCTACTTTTGCCAAGTACAATCTTCCCATACCCACTGATGATCAGTCTGAGTGGGTTATCTCCAGAGTTTTCAAGAAGGGAAAAGGTGGGCGGAGAGTCCAGATTCGCTTCGGAAATTATCCTCATGACATGCCTCCATTGATGGATgcttcaccaccaccatcacctCCACTGATGGATAACGaaatggaggttggagagtctTCTCACTCTCACGTGACCTGCTTCTCCGACACCATGGTGGATGCAGATAGCCTGGAGATGGAGACAGCAATCCAAACTGTGATTAATTCTCCGATCCCAGACAGCTTTCAGGTTCAAGATCAGTACATGAGGATGCTGATGGAAAATCCTGTGCCAACTCAGAATGATGATTTTCCTGCAGTGGAGACCAACTTTGACGCTGATGAGATCTCCTCTTTGATTTACGGCACCAACATTAACAACACTGGTGGTAATATGGTGGAGAATAATCTGATTCCATCTGAGGAACAAGTTTATTATCCATTACCACCTCCTGCTGCTGGACCTGGGGACATTGTTTCCCTCTGGAATTACTGA 963 0.433 MTNVDTLSCGFRFHPTDDELIDHYLCPKTLNSDFDPIAVAEVDLNRVEPWDLPSRAKMGENELYFFSIRDKKYPTGSRTNRATEAGYWKATGKDKDVLRAHKLLIGMKKTLVFYLGRAPRGEKTNWVMHEYRLDPTFAKYNLPIPTDDQSEWVISRVFKKGKGGRRVQIRFGNYPHDMPPLMDASPPPSPPLMDNEMEVGESSHSHVTCFSDTMVDADSLEMETAIQTVINSPIPDSFQVQDQYMRMLMENPVPTQNDDFPAVETNFDADEISSLIYGTNINNTGGNMVENNLIPSEEQVYYPLPPPAAGPGDIVSLWNY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2795 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 7 257 - -
Sto8g2795 320 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Sto8g2795 320 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Sto8g2795 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 257 - -
Sto8g2795 320 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Sto8g2795 320 ProSiteProfiles NAC domain profile. 7 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2795 Sto-Chr8 20225552 20226721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2795 10 320 NAC Transcription Factor Family AT5G07680 43.413 1.57e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g2795 NAM 1.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2795 - - mnt:21396746 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2795 8 20225552 20226721 Sto8g2795 8 20225552 20226721 ECH