Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2789 ATGCCTCTAGATTCAAGAATGGATGGATCAACTGGCCGAGGCAGCAGTGGTGTAGACATGTTCCTACCGAATTATAAGTTAGGAAAAACGCTTGGCATTGGGTCCTTTGGCAAGGTGAAAATTGCGGAGCATGTATTGACTGGTCATAAAGTTGCCATTAAGATCCTTAATCGGCGCAAGATAAAGAACATGGATATGGAAGAAAAAGTgagaagagaaatcaaaattttaagattGTTCATGCATCCTCACATTATACGACTTTATGAGGTCATAGAAACTCCAACTGACATATATGTTGTTATGGAGTATGTGAAATCCGGGGAGCTCTTTGATTACATTGTAGAAAAGGGTAGGCTGCAAGAAGATGAAGCCCGTAATTTCTTCCAGCAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTCTATATGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCAAAcctatttaagaaaattaagGGTGGGATTTATACTCTTCCTAGTCATCTATCGCCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGACCCTATGAAGAGGATGACCATACCTGAGATTCGGCAACACCCATGGTTCCAAGCTCGTCTTCCCCGTTATTTGGCAGTGCCACCACCAGATACAATGCAACAAGCCAAAAAGatTGACGAGGAAATTCTTCAGGAAGTGGTTAACATGGGATTTGACAGGAATCAACTGGTTGAATCTCTTCGCAACCGAATGCAAAATGAGGCTACTGTAGCATACTATTTGTTATTGGACAATCGGTTTCGTGTTTCAAGTGGCTATCTTGGAGCTGAATTTCAAGAGACAGTGCCCCGTGTGAAATGGGAACATTGCTAG 912 0.4046 MPLDSRMDGSTGRGSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVNMGFDRNQLVESLRNRMQNEATVAYYLLLDNRFRVSSGYLGAEFQETVPRVKWEHC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2789 303 Pfam Protein kinase domain 25 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2789 303 CDD UBA_SnRK1_plant 238 278 - -
Sto8g2789 303 SUPERFAMILY UBA-like 226 275 IPR009060 GO:0005515
Sto8g2789 303 SUPERFAMILY Protein kinase-like (PK-like) 22 233 IPR011009 -
Sto8g2789 303 Gene3D Transferase(Phosphotransferase) domain 1 135 224 - -
Sto8g2789 303 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Sto8g2789 303 SMART uba_6 239 276 IPR015940 -
Sto8g2789 303 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 237 277 IPR015940 -
Sto8g2789 303 PANTHER SERINE/THREONINE KINASE 132 246 - -
Sto8g2789 303 PANTHER SERINE/THREONINE KINASE 14 135 - -
Sto8g2789 303 Gene3D Transferase(Phosphotransferase) domain 1 16 134 - -
Sto8g2789 303 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 132 246 - -
Sto8g2789 303 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 135 - -
Sto8g2789 303 Pfam UBA/TS-N domain 238 274 IPR015940 -
Sto8g2789 303 Gene3D - 233 279 - -
Sto8g2789 303 ProSiteProfiles Protein kinase domain profile. 25 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2789 Sto-Chr8 20135964 20138736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2789 25 217 CBL-interacting serine-threonine protein kinases AT5G35410 35.294 2.67e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Sto8g2789 Pkinase 6.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2789 K07198 - psom:113326120 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2789 8 20135964 20138736 Sto8g2789 8 20135964 20138736 ECH