Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2786 ATGGGTTGCATTAACTCCAAGAATGCCTTTGCCAGCACTTCTTCACCTGCGTATTTGCATTCCCTGTCAGCAGCAACAGATAATAGGTCTGCCATTGCGGAGCCTCCAACTAGAGCACAATCTGGGGTGCTGATTACTGACAACAAACCAGAAGAAACATCGGAGGATCCGAGCCGGGATGGGAAAAAATTTAGGAAGAACAGCTCCAAGGGAACTGGCTCTTTCAGAATGGGGTTTTCGCATAGGTTCGTCGAAGCCGAGCAGAATGCAGCTGGATGGCCCCTTTGGCTCACCTCTGCTGCAGCAGAAGCTATCCAAGGATGGGTGCCCCTCAAAGCAGAGTCTTTTGAGAAATTAGATAAGATTGGACAAGGAACTTATAGCAGTGTGTTCCGGGCACGAGAAGTTGAAACTGGGAAGATGGTTGCCTTGAAGAAGGTGCacattgaaaattttcaacctGAAAGCATTAGGTTCATGGCAAGAGAAATAATGATCTTGCGCAGGCTTGACCATCCTAACATCATGAAATTGGAGGGTATAATTACATCCCGACTATCAAGTAGCATATACCTTGTATTTGAATACATGGAACACGATCTTGCAGGCCTAGTATCTTCCCCTGACATCAAGTTCAGTGAAACTCAGGTTAAATGTTATATGAGGCAGCTATTAAGTGGACTTGAGCACTGTCACCTCCATGGGGTCATGCATCGCGATATTAAAGTATCCAATATATTGGTGAATAACGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTAACCCCAACAGCAGGCATCCATTAACCAGCCGTGTAGTGACTCTCTGGTATCGTGCTCCTGAACTTTTGATGGGATCAACAAATTACGGAGTATCAATAGATCTATGGAGTGTGGGCTGCGTATTTGCTGAACTTTTTTTGGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTgaacaaatacacaaaatatttaagctttgtGGTTCTCCACCTGATGAGTTCTGGAAAACGTCTAAGCTTCCGCATGCAACGGTGTTTAAACCTCAGACTAATTATGAAAGCACACTATGGGAGAGGTGTAAAGATCTTCCAGTAACTGCTGTAAACCTAATTGAGACTCTACTTTCTATTGACCCTTCTAAGCGTGGGACTGCCTCTTCTGCCCTGATATCTGAGTATTTCAGCACCAAGCCATATGCTTGTGATCCATCAATCCTACCAAAGTATCCTCCTAACAAAGAAATGGATGCCAAAAATCGGGAAGAGGCACGCAGGTAA 1296 0.4336 MGCINSKNAFASTSSPAYLHSLSAATDNRSAIAEPPTRAQSGVLITDNKPEETSEDPSRDGKKFRKNSSKGTGSFRMGFSHRFVEAEQNAAGWPLWLTSAAAEAIQGWVPLKAESFEKLDKIGQGTYSSVFRAREVETGKMVALKKVHIENFQPESIRFMAREIMILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFSETQVKCYMRQLLSGLEHCHLHGVMHRDIKVSNILVNNEGVLKIGDFGLANTLNPNSRHPLTSRVVTLWYRAPELLMGSTNYGVSIDLWSVGCVFAELFLGKPILKGRTEVEQIHKIFKLCGSPPDEFWKTSKLPHATVFKPQTNYESTLWERCKDLPVTAVNLIETLLSIDPSKRGTASSALISEYFSTKPYACDPSILPKYPPNKEMDAKNREEARR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2786 431 MobiDBLite consensus disorder prediction 30 48 - -
Sto8g2786 431 MobiDBLite consensus disorder prediction 408 431 - -
Sto8g2786 431 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 52 430 - -
Sto8g2786 431 Gene3D Transferase(Phosphotransferase) domain 1 199 431 - -
Sto8g2786 431 MobiDBLite consensus disorder prediction 30 71 - -
Sto8g2786 431 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Sto8g2786 431 PANTHER CELL DIVISION PROTEIN KINASE 52 430 - -
Sto8g2786 431 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2786 431 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2786 431 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2786 431 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Sto8g2786 431 CDD STKc_CDK9_like 116 400 - -
Sto8g2786 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Sto8g2786 431 MobiDBLite consensus disorder prediction 49 67 - -
Sto8g2786 431 SUPERFAMILY Protein kinase-like (PK-like) 111 406 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2786 Sto-Chr8 20093441 20098215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2786 108 431 Core Cell Cycle Gene Families AT5G10270 45.882 3.71e-105 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto8g2786 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2786 - - gmx:100790917 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2786 8 20093441 20098215 Sto8g2786 8 20093441 20098215 ECH
Sto8g2786 8 20093441 20098215 Sto13g1802 13 25427885 25432960 ECH