Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2785 ATGCCAACTCACAACGCTCAATCACTCACGGCGCCGCCGCGTCCCACCATCACTCTTCCGCCGCGCCCCTCCATCGACGCCTTCTTCGCCGGCGGAGGACCCGGTGCCAGCCCTGGCCCCATGACTCTCgtctcctccttcttctccgACAACTACCCTGACTCCGACTGCCGCTCTTTCTCCCAATTGCTCGCCGGAGCTATGGCCTCTCCGCTCGCCAGGCCTAACCTGTTTGCAGACAATTCCGCCGATAATTCGTCCAGAGAAGCGGCGTCGGAGGATGGAGCGCAGAAGAATTTGGGGTTCAAGCAGAGTAGACCCATGAATTTGGTGATTGCGAGATCCCCATTGTTTACAGTACCACCTGGGCTAAGCCCTTCTGGGTTGCTTAATTCGCCGGGCTTCTTTTCGCCTCAGAGCCCTTTTGGGATGTCCCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCGCAATCACATATGCACATGCAAGCTGATTTTCACCCATCTGCTGTAGCAGCTCCTGCTGAACAATTGGCAGTGCAGCCATCCAGTACTCCAAGTGAAGCTTTGGAGCAGCAAGTGGCACCATCTTTATCAGACCCTAAAAGTGCCCAACTCGAAATATCAGAGGTTTCTCAAGCTGATAAGAAAtaccaagctccttcaatgggCATTGACAAACCTGCAGATGATGGCTATAATTGGCGCAAGTATGGGCAGAAGCAGGTTAAGGGAAGTGAGTATCCACGGAGTTACTACAAGTGTACACATCTGAATTGCCCTGTAAAGAAAAAGGTTGAGCGTGCCCCTGATGGCCACATAACTGAAATTATCTACAAAGGGCAGCATAACCATGAAGTGCCTCAACCAAATAGACGTATCAAAGATAATATTGaatcaaatgaaaataaaagaatcCAAGCAAAGTCTGAATCAAACACACAAGGTTGGGTTGGAAATTCAAACGTGGTTGGTGAAGGTATGCTTGATTGTTCAATTCCCGAGAAAGATCAGATCTCCAATGAAGGAGTTCCCAGACAGTTACCTGGATCAAGTGAGAGTGAGGAAGCAGTTGATGCAAATATTACAGAGGAAGGTGGAGATGATGGAACACTGAGGCTGGAGCTTCTGAAGTGGCGGAAGTACGGGCAGAAAGTAGTAAAGGGAAATCCTCATCCTAGGAGTTACTACAAATGCACTAGTCCAGGATGCAATGTGCGTAAGCATGTTGAGAGAGCCTCAACAGACCCCAAAGCTGTCATAACTACTTATGAGGGAAAACATAACCACGACGTGCCTGCGGCTAGAAATAGCAGCCACACCACAGCTACTACCAATTCGATGCCTTCGAAACCGCATAAAGTGATGCCTAATAATGATCAAAGACCAGCTGTTTTACGCTTTAAAGAAGAGCAAAACGTAGTATAA 1440 0.4694 MPTHNAQSLTAPPRPTITLPPRPSIDAFFAGGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLARPNLFADNSADNSSREAASEDGAQKNLGFKQSRPMNLVIARSPLFTVPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADFHPSAVAAPAEQLAVQPSSTPSEALEQQVAPSLSDPKSAQLEISEVSQADKKYQAPSMGIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEVPQPNRRIKDNIESNENKRIQAKSESNTQGWVGNSNVVGEGMLDCSIPEKDQISNEGVPRQLPGSSESEEAVDANITEEGGDDGTLRLELLKWRKYGQKVVKGNPHPRSYYKCTSPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHTTATTNSMPSKPHKVMPNNDQRPAVLRFKEEQNVV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2785 479 MobiDBLite consensus disorder prediction 79 102 - -
Sto8g2785 479 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 Coils Coil 295 315 - -
Sto8g2785 479 MobiDBLite consensus disorder prediction 439 458 - -
Sto8g2785 479 MobiDBLite consensus disorder prediction 179 239 - -
Sto8g2785 479 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 MobiDBLite consensus disorder prediction 1 33 - -
Sto8g2785 479 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 382 476 IPR044810 GO:0003700
Sto8g2785 479 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 373 IPR044810 GO:0003700
Sto8g2785 479 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 Pfam WRKY DNA -binding domain 382 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 MobiDBLite consensus disorder prediction 182 220 - -
Sto8g2785 479 Gene3D WRKY domain 369 438 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 Gene3D WRKY domain 221 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 PANTHER WRKY PROTEIN 10 373 - -
Sto8g2785 479 PANTHER WRKY PROTEIN 382 476 - -
Sto8g2785 479 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 SMART WRKY_cls 382 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 MobiDBLite consensus disorder prediction 433 479 - -
Sto8g2785 479 SUPERFAMILY WRKY DNA-binding domain 381 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g2785 479 MobiDBLite consensus disorder prediction 339 359 - -
Sto8g2785 479 SUPERFAMILY WRKY DNA-binding domain 232 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2785 Sto-Chr8 20085401 20090871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2785 7 476 WRKY Transcription Factor Family AT2G03340 48.924 1.13e-122 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g2785 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2785 - - aip:107635357 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2785 8 20085401 20090871 Sto8g2785 8 20085401 20090871 ECH