Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2781 ATGGCGGCAGCAAAACCCCAAAGGACTCCTCAAGAAGTTGAGGATATAATTCTTCGGAAAATCTTTCTCGTTTCGCTCACGGATGCCATGGAGAGCGATTCGAGAGTCGTTTACTTGGAACTGACAGCAGCTGAGATTCTCAGCGAAGGCAAGGAATTGAGGCTTTCGCGGGACTTGATGGAACGGATTCTGATTGATCGGCTTTCTGGGAATTTCGCTTCCGCCGAATCGCCTTTTCAGTACTTAATCAGTTGCTATCAGCGGGCTCACGATGAGGGTAAGAAAATTGCTAacatgaaagataaaaatttgaGGGGTGAGATGGAATCGGTGGTGAAACAAGCAAAGAAGTTGTGTGTATCGTATTGTAGGATTCATTTGGGGAATCCTGAACTGTTTCCGAGTGGAAATTCTAGTGCTAATAAGCGTGAGAACTCGCCGTTGTTACCACTTATTTTCTCTGAGGTTGGTACCACCATTGATGGCTTTGGTGGGAGTGGCAGTGCTGGAGGAGTTAAAAGCCCCCCGGGGTTTCTTGAGGAATTTTTCAGGGACTCAGACTTCGATAGTCTGGATCCAATACTGAAAGGGTTGTATGAGGAGTTGAGAGGTAGTGTGATGAAAGTTTCAGCTCTTGGGAATTTCCAAGATTCTTTGAGGGCATTGCTGTTTTTGGTTAGATTTCCCATTGGTGCAAAGTCGCTCGTGAATCACGATTGGTGGATTCCAAAGGGAGTGTATATGAATGGACGTGCCATTGAAATGACCAGCATTTTAGGTCCGTTCTTTCATATCAGTGCTCTTCCTGATCAAGCCTTTTTCAAGAGCCAGCCAGACGTTGGGCAGCAGTGCTTTTCAGAAGCATCAACTCGCCGACCATCTGATTTGTTATCTTCATTCACCACAATTAAAACTGTTATGAATAACTTATATGATGGTCTAGGTGAAGTTCTTCTCATTCTTCTGAAAAGTACAGATACTCGTGAAAATGTACTTGAGTATCTTGCTGAGGTGATCAATAAAAACGCATCCAGGGCTCATATTCAGGTTGATCCTATTACTTGTGCGAGTTCAGGCATGTTTGTCAATCTCAGTGCTGTTATGCTTCGTCTCTGTGAGCCATTTTTAGATGCAAATTTAACaaaaagagataaaattgaTGCAAAATATGTATTCTATTCAAACCGTTTGGACTTAAGAGGGTTGACTGCTCTTCATGCATCGTCTGAGGAAGTTGCTGAATGGGTCAAGAGTAATGATGGTGAGAAACGTCTGCAACGGTCTCAAGAAGCAACCAGTTCTGCTAGTAATAGTGCTGGTGATCCTTCGAATGCAAAGTCTCCATCACATGGTGAAAAGAcaaaatacacatttatttgtGAATGTTTCTTTATGACTGCAAGAGTGCTGAACTTAGGCCTCTTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGACATTTCTAGATGTGAAGATTCTCTTTCAACACTCAAGGACATGCAAGCGCAAACATCCTCTCCTCAATTGGAGTTGGATATAGCTCGGCTTGAGAAAGAAATTGAGTTGTACTCCCAAGAAAAGCTTTGTTATGAAGCTCAGATATTGCGGGATAACACATTTATTCAAAATGGTCTTTCCTTCTACCGCTTGATGGTTGTTTGGTTGGTTGGCTTGGTTGGTGGATTTAAGATGCCTCTACCATCAACCTGCCCAATGGAATTTGCATCAATGCCTGAGCATTTTGTAGAAGATGCCATGGAGTTGCTCATATTTGCTTCTCGGATCCCAAAAGCCTTAGATGGGGTTGTGCTGGATGAGTTCATGAACTTTATAATTATGTTTATGGCCAgtcctaaatttatcaaaaacccATATTTGAGAGCAAAGATGGTTGAAGTTTTGAACTGCTGGATGCCCCGTAGGAGTGGCTCAACTGCTACTGCCACTCTATTTGAAGGGCACCAACTGTCTCTTGAGTATCTTGTGAGGAATCTTTTGAAGCTTTATGTTGACATCGAGTTCACTGGTTCTCACACGCAGTTCTATGACAAGTTTAACATACGCCATAATATTGCCGAACTGCTTGAATACCTGTGGCAGGTCCCTAGTCATCGTAATGCTTGGAGACAGATTGCCAAAGAAGAGGAAAAGGGTGTATATCTGAATTTCTTAAACTTCCTGATTAATGATAGTATTTATCTTCTAGATGAAAGTTTGAACAAAATTCTTGAACTAAAAGAATTAGAAGCTGAGATGTCAAATACCACTGAATGGGAGCGACGACCAGCTCAAGAGAGACAGGAGAGGACCCGACTGTTTCACTCGCAGGAAAATATTATACGGATAGATATGAAGTTGGCAAATGAAGATGTGAGCATGCTTGCATTTACTTCAGAGCAGATTACTGCCCCTTTCCTCCTTCCTGAGATGGTTGATAGAGTGGCCAGCATGCTCAATTACTTTCTGTTGCAACTGGTGGGTCCCCAAAGAAAATCACTTAGTCTGAAGGATCCTGAAAAGTATGAATTCCGGCCAAAACATTTGCTTAAACAGATTGTGCACATATATGTTCATCTGGCCAGAGGTGATACCAACACCATCTTCCCATCCgcaatttcaaaggatggtcgATCATACAATGACCAGTTGTTTAATGCAGCAGCAGATGTCCTTCGAAGAATAGGTGAGGATGGAAGAATTATACATGAATTTGTTGAACTTGGTGCTAAAGCAAAAGTTGCAGCTTCAGAGGCCATGGATGCTGAAGCTGTTTTAGGAGAAATACCAGATGAATTTCTCGACCCAATTCAGTACACTTTGATGAAAGATCCTGTTATCTTACCTTCTTCAAGGATCACAGTTGATCGTCCTGTCATTCAGAGGCATCTTCTTAGTGATAGTACTGACCCATTCAATCGGTCTCATCTTACTGTGGATATGTTGATTCCTGATGATGAGCTGAAGGCAAGAATTGAGGAGTTTGTGAAATCCCAAGAATTGAAGAAACATGGAAAAGGCCAAAGCATGCAGGGAAGTAGTACCAAGGACACAATTCAGACCACAAATGGAGAAATGCTTATTGATTAA 3090 0.41 MAAAKPQRTPQEVEDIILRKIFLVSLTDAMESDSRVVYLELTAAEILSEGKELRLSRDLMERILIDRLSGNFASAESPFQYLISCYQRAHDEGKKIANMKDKNLRGEMESVVKQAKKLCVSYCRIHLGNPELFPSGNSSANKRENSPLLPLIFSEVGTTIDGFGGSGSAGGVKSPPGFLEEFFRDSDFDSLDPILKGLYEELRGSVMKVSALGNFQDSLRALLFLVRFPIGAKSLVNHDWWIPKGVYMNGRAIEMTSILGPFFHISALPDQAFFKSQPDVGQQCFSEASTRRPSDLLSSFTTIKTVMNNLYDGLGEVLLILLKSTDTRENVLEYLAEVINKNASRAHIQVDPITCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVFYSNRLDLRGLTALHASSEEVAEWVKSNDGEKRLQRSQEATSSASNSAGDPSNAKSPSHGEKTKYTFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDSLSTLKDMQAQTSSPQLELDIARLEKEIELYSQEKLCYEAQILRDNTFIQNGLSFYRLMVVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMASPKFIKNPYLRAKMVEVLNCWMPRRSGSTATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNTIFPSAISKDGRSYNDQLFNAAADVLRRIGEDGRIIHEFVELGAKAKVAASEAMDAEAVLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPDDELKARIEEFVKSQELKKHGKGQSMQGSSTKDTIQTTNGEMLID 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2781 1029 SUPERFAMILY RING/U-box 921 1000 - -
Sto8g2781 1029 Coils Coil 507 534 - -
Sto8g2781 1029 MobiDBLite consensus disorder prediction 418 451 - -
Sto8g2781 1029 MobiDBLite consensus disorder prediction 428 451 - -
Sto8g2781 1029 SMART Ubox_2 932 995 IPR003613 GO:0004842|GO:0016567
Sto8g2781 1029 PANTHER UBIQUITINATION FACTOR E4 1 1003 IPR045132 GO:0000151|GO:0030433|GO:0034450
Sto8g2781 1029 MobiDBLite consensus disorder prediction 1000 1029 - -
Sto8g2781 1029 CDD RING-Ubox_UBE4A 931 999 - -
Sto8g2781 1029 Pfam Ubiquitin elongating factor core 259 912 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Sto8g2781 1029 MobiDBLite consensus disorder prediction 1005 1029 - -
Sto8g2781 1029 Pfam U-box domain 929 1000 IPR003613 GO:0004842|GO:0016567
Sto8g2781 1029 PANTHER - 1 1003 - -
Sto8g2781 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 928 1007 IPR013083 -
Sto8g2781 1029 ProSiteProfiles U-box domain profile. 928 1002 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2781 1 1029 U-box Gene Family AT5G15400 77.143 0.0 1655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2781 8 20046127 20054305 Sto8g2781 8 20046127 20054305 ECH