Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2779 ATGCGcagtttcttcttctctctagcTCATGTATTCACGGTTCTATCTATGCATCTAATTCGAGATTGGTGTATGAATGTATATAGGTGGATTGATCGACAGGTGCTGGAAAGGAATTCGAGAAGTAGCAGAGGCGGAGAGAACGGCGGCGGCGATGATATCACAATCTCGAACTCCTCCGTCGAGTGCTACGCGTGCACTCAGGTCGGCGTTCCGGTGTTCCACTCCACGAGCTGCGACGGTTACCACCAGCTTCAATGGGAGGCGTCGGCGGGATCTTCCTTGATCCCAATCCAGAACCGATCCGCGAGCAAGAACCCAACCCGACCGAAATCGGGGCCGTTCGGGCGAGTTCTGGACCCGCGGAGCAAGCGCGTGCAGAAGTGGAACCGGGCGTTGCTGTTGGCGCGTGGAGTGGCGCTGGCGGTGGATCCGCTGTTCTTCTACGCGCTGTCGATAGGGAGGGACGGGACGCCGTGCCTGTACATGGACGGAGGTCTGGCGGCGATCGTGACGGTGCTCCGCACGTGCGTGGACGCCGTGCACCTGTGCCACGTGTGGCTGCAGCTGAGGATGGCTTACGTGTCGAAGGAGTCGCTGGTGGTTGGGTGCGGGAAGCTGGTGTGGGATGCACGTGCCATAGCGTCGCATTATCTGTTCTCGCTCAACCGCTTCTGGTTCGATGCCTTCGTGATCCTTCCTATTCCGCAGGCTGTGTTTTGGTTCATACTCCCTAAATTATTAAGGGAGGAGCGAATTAAAATCATGATGACTATACTGCTATTGATCTTCCTGTTCCAATATCTCCCCAAGGTCTACCACAGCATCCGTTTGATGAGAAGAATGCAAAAAGTCACTGGCTATATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATctcttggcatacttcattgcTTCTCATGTTGCTGGAGGGTGCTGGTATGTGCTTGCAATTCAACGTGTTGCATCATGCCTCCAGCAGCAATGTGAAAGGAATCCTGGTTGTAATCTCTCTCTTTCATGCTCAGAGGAGGTATGCTACCAGAATTTGTTACCAAAAAGCTCACTAGGAAATCCATGTAGTGGAAACTCCACAACAATGGCTAGAAAGCAGCCATTGTGCTTAGATGTTGAAGGGCCTTTCAGATATGGGATTTACCAGTGGGCTCTTCCAGTCATTTCCAGCAATTCCTTGGCTGTCAAGATTCTATATCCCATTTTTTGGGGTTTGATGGCCCTCAGCACCTTTGGCAATGATCTTGAACCCACCAGTCACTGGCTAGAAGTAATTTTCAGCATATGCACAGTACTGAGTGGATTATTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGTTGAGATGCCGGGACATGGAATGGTGGATGAGGAGGAGACAGCTACCGTCTTGTTTAAGACAAAGAGTTCGCCATTTCGAGCGGCACAGATGGGCAGCCATGGGAGGAGAAGATGAATTGCAATTGATCAAAGACTTGCCTGAAGGTCTAAGGAGGGACATCAAGCGCTATCTATGCATAGACCTCATAAAAAAGGTACCTTTGTTTCACAACTTGGATGATCTTATACTTGATAATATCTGTGACAGAGTTAAACCCCTAATCTTTTCTAAGGATGAAAAGATAATTAGAGAAGGCGATCCAGTGGCAAGGATGGTGTTCATAGTTCGTGGAAGGATAAGAAGCAGTCAAAACCTAAGCAAAGGCATGGTAGCCACCAGTAACCTCGAAGCCGGAGGGTTTCTAGGCGACGAGCTACTCTCGTGGTGCCTTCGCCGGCCTTTTATCGACCGGCTTCCGGCATCCTCGGCCACATTTGTAGCCGTGGAATCAACCGAAGCCTTTGGCCTTGATGCTTCCCACCTCAAGTACATCACTGATCACTTCCGCTACAAATTTGCCAATGAAAGACTCAAGAGAACAGCAAGATACTACTCATCCAATTGGAGAACCTGGGCTGCTGTAAATATCCAACTTGCTTGGCAAAATTACAGGAAAAGGAAGAGAGGTCCATTGATGGAAAATGGAGGCAGTACCAGTACTGAACGTAGGCTGTTGCAGTATGCTGCAATGTTTATGTCAATAAGGCCACATGACCATCTTGAATAA 2169 0.485 MRSFFFSLAHVFTVLSMHLIRDWCMNVYRWIDRQVLERNSRSSRGGENGGGDDITISNSSVECYACTQVGVPVFHSTSCDGYHQLQWEASAGSSLIPIQNRSASKNPTRPKSGPFGRVLDPRSKRVQKWNRALLLARGVALAVDPLFFYALSIGRDGTPCLYMDGGLAAIVTVLRTCVDAVHLCHVWLQLRMAYVSKESLVVGCGKLVWDARAIASHYLFSLNRFWFDAFVILPIPQAVFWFILPKLLREERIKIMMTILLLIFLFQYLPKVYHSIRLMRRMQKVTGYIFGTIWWGFGLNLLAYFIASHVAGGCWYVLAIQRVASCLQQQCERNPGCNLSLSCSEEVCYQNLLPKSSLGNPCSGNSTTMARKQPLCLDVEGPFRYGIYQWALPVISSNSLAVKILYPIFWGLMALSTFGNDLEPTSHWLEVIFSICTVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSCLRQRVRHFERHRWAAMGGEDELQLIKDLPEGLRRDIKRYLCIDLIKKVPLFHNLDDLILDNICDRVKPLIFSKDEKIIREGDPVARMVFIVRGRIRSSQNLSKGMVATSNLEAGGFLGDELLSWCLRRPFIDRLPASSATFVAVESTEAFGLDASHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRKRGPLMENGGSTSTERRLLQYAAMFMSIRPHDHLE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2779 722 Gene3D - 161 458 - -
Sto8g2779 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 61 722 - -
Sto8g2779 722 SUPERFAMILY Voltage-gated potassium channels 120 456 - -
Sto8g2779 722 CDD CAP_ED 535 642 IPR000595 -
Sto8g2779 722 Pfam Ion transport protein 129 453 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto8g2779 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 61 722 - -
Sto8g2779 722 SMART cnmp_10 535 661 IPR000595 -
Sto8g2779 722 Gene3D Jelly Rolls 533 651 IPR014710 -
Sto8g2779 722 SUPERFAMILY cAMP-binding domain-like 462 649 IPR018490 -
Sto8g2779 722 ProSiteProfiles cAMP/cGMP binding motif profile. 535 645 IPR000595 -
Sto8g2779 722 Gene3D Helix hairpin bin 461 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2779 Sto-Chr8 20022593 20029911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2779 59 722 Ion Channels AT5G15410 77.434 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2779 K05391 - qsu:112022399 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2779 8 20022593 20029911 Sto8g2779 8 20022593 20029911 ECH