Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2772 ATGGGAAACTTTCCCAAGTGCTTTGGCGATTCCAACGCAAGGAAACAGCCATCATCAACAACGACAATTGAACAATTATGCCAATGCCATCGCTTCTCTTTCCCCCAACTCCAAAAATTAACTCACAACTTCCACCAAACTCGACTAATCGGACAAGGAGCCTTCGGTTACGTGTACAGATCTTCCATCTCCATCAATGGCCGACCCAAAGAGATTGCAATAAAGCGAGCGAAAAATTCACCTCAAGGGATGGCTCAGATTGAGAACGAAATCCTCTTCTCATGCCAGCTGCACCATCCCAATCTCATCTCTCTCCTTGGATTTTGCAACGAGAAAGAGGAAAAGATCGCGGTGTACGAATTCATGCCGAACGGATCCCTCAAGCACCAACTATACAATCACCCGATGATACTATCGTCGTGGAAGAAGAGGCTGGAAATCAGCATAGGAGCAGCGCGTGGGCTGCACTACCTCCACACCGGAGCGAAACGCACCGTCGTACACCGCGATTTCAAGATCGGCGACGTTCTTCTGGATGAGGATTGGAACCCTAGAATTACAGATTTGGGACTTTCTCTGAAGGGGCCGAAATTTTCGTCAAAGCCGAAGCCCATAGAAGCAAAACTTGCGGGTACACTTGTGTACTTAGCCCCGGAGTACATGTACGAGGGCAGAGTCTCGGATAAATCGGATGTTCATTCCTTTGCGGCGGTTTTGGTGGAATTGGTATGTGGAAAGACGCCGTATGAAGTGGCGAAAGAGATGGGAAGGGATAGGGATAtttatgaagatgaagatggagatGATTCGCCTTTCAAGAATCCAGGcaagtatataaaatttattgtgGAAAGGGGAAATGGTGAGAAGATTATAGATCCAAATTTGGTGGGGAAAATCGGAGCAGAGTGTTGGAAAGTATACATAGACGTTGTTGAAAGATGCTTGAATAGAGATGAGAATGAGAGGCCAGGAATGGGTGAAGTGGAGGTGGAACTTGAGCGTGCCTTGGAATTGCAAGAACAAGCTGAAGCCAATAATGACGGTAATTCCGACCCAAGGAAACAATCCTCCTCCTCCACAACAATCGAACAACTATGCCATCGCTTCTCCTTCCGCCATCTCCAAAAATCAACCCACAACTTCCACGAGAGCCGACTCATCGGGCGGGGAAGCTTCAGCGAAGTGTACCGAGCCTCCCTCTCCCTCGATAATGGCCAAACCAAGGAAGTCGCAATCAAGCGAGTCCGACCCGACTCACCCGAAGGTGTGGTCCTATCATTCGAGAACGAAATCCTCCTGCTATGCCAACTCCACCATCCCAATCTCATCCCCCTCCTCGGATTCTGCATCGACGAGAAAGAGATGATCGTGGTGTACGAGTACATGCCGAACGGAAACCTCGCTCACCAATTGTTCACCAACGTTCCTGATTCGCCGCCGCCGTCGTGGAAGCGGAGGCTAGAAATCGGCATGGGAGCGGCGCGTGGGCTTCACTACCTCCACGCCGGGGTGAAACGCACCATCGTACACCGCGATTTCAAACCAACCAACATCCTCCTGGACGAGAATTGGAACCCTAGAATTTCGGATTTCGGGCTCTCTTTTACGGGGCCCAAATTCTCATCGGACCCGAAGCCGATCGAAGCGGACCGTATTGCGGGCACGCTCGAATACATGGCCAAGGAATACGCGTTCTTCGGCGAGATCTCGGATAAATCGGATGTTTACTCCTTCGGGGTGGTTTTGGTGGAACTGGTGTGCGGAAAATCGTCGCGTGGAGTGAGGGAAGAGATGGAGAAGGAGGAAGGTGCGTATTCTTTGAATGTGGGCAAGTATATGAAGGAGATTGTGGAGAGGGGAAATGGCGAGAGGATTATAGATCCGAATTTGGTGGGGAAGATTGGGGCGGAGTGTTGGAAGTTGTACGTGGACATTGTTGAGAGATGCTTGGATGAAGATGCGAGTGAGAGGCCAGGAATGGGTGAAGTGGAGGTGGAGCTTGAGCGTGCGTTGGAATTGCAAGAGCAGGATGAAGCCAATaatgagtttgttcatcatccTAAGGCAACTTCAAATTCTCAACAATAA 2091 0.4868 MGNFPKCFGDSNARKQPSSTTTIEQLCQCHRFSFPQLQKLTHNFHQTRLIGQGAFGYVYRSSISINGRPKEIAIKRAKNSPQGMAQIENEILFSCQLHHPNLISLLGFCNEKEEKIAVYEFMPNGSLKHQLYNHPMILSSWKKRLEISIGAARGLHYLHTGAKRTVVHRDFKIGDVLLDEDWNPRITDLGLSLKGPKFSSKPKPIEAKLAGTLVYLAPEYMYEGRVSDKSDVHSFAAVLVELVCGKTPYEVAKEMGRDRDIYEDEDGDDSPFKNPGKYIKFIVERGNGEKIIDPNLVGKIGAECWKVYIDVVERCLNRDENERPGMGEVEVELERALELQEQAEANNDGNSDPRKQSSSSTTIEQLCHRFSFRHLQKSTHNFHESRLIGRGSFSEVYRASLSLDNGQTKEVAIKRVRPDSPEGVVLSFENEILLLCQLHHPNLIPLLGFCIDEKEMIVVYEYMPNGNLAHQLFTNVPDSPPPSWKRRLEIGMGAARGLHYLHAGVKRTIVHRDFKPTNILLDENWNPRISDFGLSFTGPKFSSDPKPIEADRIAGTLEYMAKEYAFFGEISDKSDVYSFGVVLVELVCGKSSRGVREEMEKEEGAYSLNVGKYMKEIVERGNGERIIDPNLVGKIGAECWKLYVDIVERCLDEDASERPGMGEVEVELERALELQEQDEANNEFVHHPKATSNSQQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2772 696 ProSitePatterns Protein kinases ATP-binding region signature. 50 75 IPR017441 GO:0005524
Sto8g2772 696 SUPERFAMILY Protein kinase-like (PK-like) 366 666 IPR011009 -
Sto8g2772 696 Gene3D Phosphorylase Kinase; domain 1 8 121 - -
Sto8g2772 696 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Sto8g2772 696 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 348 - -
Sto8g2772 696 PANTHER TYROSINE KINASE FAMILY PROTEIN 356 683 - -
Sto8g2772 696 ProSiteProfiles Protein kinase domain profile. 382 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2772 696 Coils Coil 326 346 - -
Sto8g2772 696 Pfam Protein kinase domain 44 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2772 696 ProSitePatterns Protein kinases ATP-binding region signature. 388 414 IPR017441 GO:0005524
Sto8g2772 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Sto8g2772 696 ProSiteProfiles Protein kinase domain profile. 44 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2772 696 Pfam Protein tyrosine and serine/threonine kinase 385 666 IPR001245 GO:0004672|GO:0006468
Sto8g2772 696 Gene3D Phosphorylase Kinase; domain 1 367 462 - -
Sto8g2772 696 MobiDBLite consensus disorder prediction 677 696 - -
Sto8g2772 696 Gene3D Transferase(Phosphotransferase) domain 1 122 362 - -
Sto8g2772 696 Gene3D Transferase(Phosphotransferase) domain 1 463 693 - -
Sto8g2772 696 PANTHER OS07G0166700 PROTEIN 18 348 IPR045272 GO:0004714|GO:0006468
Sto8g2772 696 PANTHER OS07G0166700 PROTEIN 356 683 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2772 Sto-Chr8 19944646 19952043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2772 357 685 Receptor kinase-like Gene Family AT3G51550 42.727 2.72e-73 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto8g2772 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2772 - - adu:107486597 419.853