Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2763 ATGGCAACTGCGAGAACCGTCAAGGACGTTTCGCCTCACGAGTTTGTGAAGGCTTATTCCGCTCACCTCAAGCGCTCTGGTAAGATGGAGCTTCCTGAGTGGACAGATATAGTAAAAACTGCTAGATTTAAAGAACTGGCTCCATATGACCCTGACTGGTATTATGTTAGAGCCGCCTCCATGGTAAGAAAGATCTATTTGAGAGGTGGTCTTGGTGTTGGTGCCTTCCAAAGGATCTATGGTGGAAGCAAGAGGAATGGAAGCCGACCCCCTCATTTCTGCAAGAGCAGCGGAGCTATTGCCAGACACATTCTGCAACAGTTACAAAACATGAACATTATCGATGTTGATCCAAAAGGAGGTAGGAGAATCACTTCTAGTGGACGAAGGGATCTTGACCAAGTTGCTGGGAGAATTACGGTAGTTGCTGCTTAA 435 0.4667 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMVRKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDVDPKGGRRITSSGRRDLDQVAGRITVVAA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2763 144 Gene3D - 1 143 IPR036388 -
Sto8g2763 144 Pfam Ribosomal protein S19e 6 139 IPR001266 GO:0003735|GO:0005840|GO:0006412
Sto8g2763 144 PANTHER 40S RIBOSOMAL PROTEIN S19 3 141 IPR001266 GO:0003735|GO:0005840|GO:0006412
Sto8g2763 144 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Sto8g2763 144 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Sto8g2763 144 SUPERFAMILY "Winged helix" DNA-binding domain 6 140 IPR036390 -
Sto8g2763 144 PANTHER 40S RIBOSOMAL PROTEIN S19-3 3 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2763 Sto-Chr8 19836090 19839923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2763 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 85.612 8.02e-92 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2763 K02966 - gmx:100499800 277.33