Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2734 ATGATGTTATCACTCGCCATAACTCTCGCTTGCGTTCGCCTCCGCCGCCTCGCCTCCACGAATCCCACACCCTTCGACGTTCTtcatcctcttcctcctccttctacGGTGGAGCTCACCGTCGCGGAACGCGGCCTCGACGAGGACACACTCAACACATATTACCCCAAGATGCCGTACTCCGAGGTTGTGCTCAAGAAGAAGGGGGCTAATTTGAATACTTGTGACGACTCTTCGGATTATTACTCCTCGTGTTCCATCTGCCTGGGAGATTTCCAAGAAAGTGACACCTTGAGATTGCTGCCTGATTGTGGTCATCTCTATCATGTGAGTTGCGTTGACCCTTGGCTTAGatgttcttcttcttctggatTCCCACAGGACTCTTCAGGAACGACGCTCATGGATCTAATCACGGCGGACCCAACCTCGGCTCCGTCCTCCGCTCCTTCTGCTTCGAATGCGGCTGCATCTTCAGCCGCGGCGGCTCCGGCTGGTCAGCCGACCGCCCTGGGCAAGCCGGCCGGGGAGAAGAGGTCGAAGAGAGCCGCGTTTATGCAGATCCAGACCGACACCCTAACGGTTGCGAAAGCTGCTTTAGGACCAGTTAGGAATAACATAATGCCGCAAAAGCAGAAGAAAAAGCCAGTTTCATATTCACAACTTGCGAGGAGTATTCATGAACTAGCTGCTACATCTGATCAAAAAAATTCTCAGCGGCAATTAGTGCGCCATGTATTTCCTAAACTTGCTGTGTACAACTCAGTGGACCCGTCATTGGCTCCTTCACTTCTCATGCTTAATCAGCAATGTGAAGATAGAAATATCCTTCGGAATGTCTATTACTATCTGGCCAGGATTTTGTCTGACAATGGTGCCCAAGGTTTGAGTTCAGGTGGAGGGATACCTACTCCAAACTGGGATGCTCTGGCTGACATTGATGCTGTTGGAGGCGTTACACGGGCTGATGTTGTGCCACGAATAGTAGAACAGCTTACATCAGAAGCCAAAAATGCTGATGTTGaatGTGTTTTCACAATAGGCATGGAGCTAGTTGCTAGTTTTGCATATCAGGTGGTCATGTGTGAGAGCTTAAGGCTTAGGTGTATAGGAGTATTTGACTCCGGTAATACTGTTACAGGGCCAAAGGAGTACAGATGTAGAGTTTTGGAGATTCCCTGCCTTCCCCCTCTTACTCTTACAATTATAAATCTTGAGTTTGAAATGAGATTGGATTTAGGCATTAGAGGCAAGGAATTCATGGGGATATGA 1272 0.4733 MMLSLAITLACVRLRRLASTNPTPFDVLHPLPPPSTVELTVAERGLDEDTLNTYYPKMPYSEVVLKKKGANLNTCDDSSDYYSSCSICLGDFQESDTLRLLPDCGHLYHVSCVDPWLRCSSSSGFPQDSSGTTLMDLITADPTSAPSSAPSASNAAASSAAAAPAGQPTALGKPAGEKRSKRAAFMQIQTDTLTVAKAALGPVRNNIMPQKQKKKPVSYSQLARSIHELAATSDQKNSQRQLVRHVFPKLAVYNSVDPSLAPSLLMLNQQCEDRNILRNVYYYLARILSDNGAQGLSSGGGIPTPNWDALADIDAVGGVTRADVVPRIVEQLTSEAKNADVECVFTIGMELVASFAYQVVMCESLRLRCIGVFDSGNTVTGPKEYRCRVLEIPCLPPLTLTIINLEFEMRLDLGIRGKEFMGI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2734 423 MobiDBLite consensus disorder prediction 138 182 - -
Sto8g2734 423 MobiDBLite consensus disorder prediction 138 160 - -
Sto8g2734 423 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 128 343 - -
Sto8g2734 423 SMART ring_2 85 122 IPR001841 -
Sto8g2734 423 Pfam RING-like zinc finger 85 113 IPR001841 -
Sto8g2734 423 SUPERFAMILY RING/U-box 84 122 - -
Sto8g2734 423 ProSiteProfiles Zinc finger RING-type profile. 85 119 IPR001841 -
Sto8g2734 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 46 126 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2734 Sto-Chr8 19440630 19448789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2734 45 118 C3H Transcription Factor Family AT2G35910 47.297 1.06e-14 71.2