Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2733 ATGGTCCTCTACATCACCATCTTCCTATTCGCTTGCGTCAGACTTCGCCTCCCTCCTCTAAACATTTTAGTCTCGTCCGTACAACCCATCGTCGTCGCGGGGCCCACGAGTACGGATCATGATGATGCACGACATGGCGGCATCGACGACGAGACCCTTGAGAGTTATCCCAAGTTCTCGTACTCAGAAGTACTGCGGGATTCATCATTGAGATCGTTGGTTTCTTGCTCCATTTGTTTAGATGATTACAAGGAGAGTGATGTGCTGCGAAAGCTGCTGGATTGTGGTCATCTCTATCACCTTGAGTGTATTGACTCGTGGCTTAAGTCACATCGTACTTGCCCTCTGTGCCGTACCTCGCCGACCCCGGCTTGGTCGGTGGCGGATCACCTGATGGTGATACATGGTCTTCCACTCATGACCCCCATAGTTGTCGTCGTCCTGATTGTACGTCCACCGTCGTTGCCGTCGAGATTTAGGAGGTGCTACATCGGCACCCACCGTCGTCTCTCGTCTTCTCTGGGGTCGGTGATTGTAACCGTTGCCGTCGAGATCAAGGAATGGCTGCGTTTTGAACTTGTGAAGACGAGGTTGCCGAAGATGATGTGA 609 0.5222 MVLYITIFLFACVRLRLPPLNILVSSVQPIVVAGPTSTDHDDARHGGIDDETLESYPKFSYSEVLRDSSLRSLVSCSICLDDYKESDVLRKLLDCGHLYHLECIDSWLKSHRTCPLCRTSPTPAWSVADHLMVIHGLPLMTPIVVVVLIVRPPSLPSRFRRCYIGTHRRLSSSLGSVIVTVAVEIKEWLRFELVKTRLPKMM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2733 202 CDD RING-H2_PA-TM-RING 76 118 - -
Sto8g2733 202 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 2 124 - -
Sto8g2733 202 ProSiteProfiles Zinc finger RING-type profile. 76 118 IPR001841 -
Sto8g2733 202 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 124 IPR045899 -
Sto8g2733 202 SUPERFAMILY RING/U-box 52 124 - -
Sto8g2733 202 SMART ring_2 76 117 IPR001841 -
Sto8g2733 202 Pfam Ring finger domain 75 118 IPR001841 -
Sto8g2733 202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 123 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2733 Sto-Chr8 19430148 19431489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2733 33 147 C3H Transcription Factor Family AT2G35910 39.370 6.25e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2733 - - dcr:108193040 114.39