Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2732 ATGAACAATACGACGTCCGTCTACTCACCAAACGACAACCACATCCGCGGCTTCACGTACGGCATCGTTTTCACCATCGCCATGGTCCTCTTCATCACCATCTTCCTATTCGCTTGCGTCAGACTTCGCCTCCCCCTAAGCATCCTAGCCTCGTCCGTACAACCCATCATCGTCGTCGCGGGGCCCACGAGCACGGATCACGACGACGACGCGCGACGAGGCGGCATCGACGACGAGACCCTGGAGAGTTATCCCAAGCTCTCGTACTCAGAAGTACTGCGGGATTCATTACTGGGGTCTTTAATTTCTTGCTCCATTTGTTTAGATGATTACAATGAGAGCGATGTGCTGCGGAAGCTGCCGGATTGCGGTCATCTCTATCACCTCGAGTGTATTGACTCGTGGCTTAAGTCGCACCGTACTTGCCCGTTGTGCCGTACCGCGCCGACCCCGGCTCGGCCGGAGGCGGATCACGTGATGGCGATACGTGTTGAATAG 498 0.5582 MNNTTSVYSPNDNHIRGFTYGIVFTIAMVLFITIFLFACVRLRLPLSILASSVQPIIVVAGPTSTDHDDDARRGGIDDETLESYPKLSYSEVLRDSLLGSLISCSICLDDYNESDVLRKLPDCGHLYHLECIDSWLKSHRTCPLCRTAPTPARPEADHVMAIRVE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2732 165 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Sto8g2732 165 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 10 152 - -
Sto8g2732 165 SUPERFAMILY RING/U-box 103 151 - -
Sto8g2732 165 CDD RING-H2_PA-TM-RING 104 146 - -
Sto8g2732 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 151 IPR013083 -
Sto8g2732 165 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 152 IPR045899 -
Sto8g2732 165 Pfam Ring finger domain 103 146 IPR001841 -
Sto8g2732 165 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2732 Sto-Chr8 19423866 19424363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2732 15 151 C3H Transcription Factor Family AT2G35910 36.424 2.26e-24 92.8