Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2731 ATGCCCATCCCAACATCCCGTCCAGTTCACTCTCGTCAGAGTGAAACGGGTACATCCATTCGGATCCTCCATGGACAGGAGCGTCGGAAAATAGTGCTCCTCCGGGTAACACGGCTCCTCGCTCACGCAAGGAAGCTTGAACTTCCTCCACACCCTCCGATCCTCCACCACCAGCGCCGCGTGCCGCCGGGTCAGCACGAAGAACTGGGATCCGACCCGGAATTCCTCGAACGGCACCTCCGGCAGCATCGCGCCCGCGCCGCCGCGAGCCAAGTACCGGCGGATGAGATTGGGCTCATCGGAGATAATCTCGATGAAGCTTCTGTTCCGAGAGCGCGATTCGCCCTCGCGTTCGAACAGGAAACCGTACACGAAGCGGAAAGAACGGATCGGGACACAATGCTGCGACACGAGGGCGAAGGTAACGGAGGGGTCCAAATGGACATAGATGTTGAAGAGATTCTGGTTTCTTCGGAAGAATTTCTCCCACAAGGGAGCGAAAGAGAGATTCGAGTTCGTGAGGAACAGGAATGCGATTTTGGGCTTGGGATCGTGGGAGACGGAATGAACTCCGGCGGCGGGGCTACGCCGGAGAGGGTGGTGGTTGAGGTCGCCGGCGAGGGGGGTGGGAAGATGAGCAACACCACATCACCGAACATGAACTCCGTCTCCGACGACAACGAATCTCCCTCGCCGGACCTAACCGGCTACGGCTACTACACCTTCGGACTATCCATCGGCGTCCTCCTGCTCTTCTGCCTCATCACCGTAGCCATGTACTACTTCTCCTCCCGCCGAAACCCCACTACCGACACCAACGAAACAATCACGGCCGCCGgagaccaccaccaccacctctcTCCTCCGTCACGAGCCGCCGCCGGCGTGGATGATTCGACCCTGAGGAGTTACCCGGCGGTATTGTACTCGGAGCTAGCGAAGTCGTGGAAGCTCCAGCTGGATGATTGGGATTGGAGGAGAGGGTGTTCCATATGTCTGGGAGATTACAAAGAGAGCGAGTGGGTGCGAGTATTGCCGGAGTGTTCTCACTTGTTCCATCGGAACTGTATTGATGTGTGGTTGAGGATGAACTCTTCTTGTCCTCTCTGTCGGAACTCGCCCTTGCCCTCGCCGATTGCTCAAGTTGCACCCTTGGCCCCTTGGCATTGCAAAGCCAACTTTCTCAAAGTAGTAATCCCACTCAAGCTAAGTCAGCCGCCTAGTCATGGAGgTAAGTGTGAGAAATTTATGAACCCAACGTCTGCTTCTTCTATTACTCGTTTGCTGCTTCACATCATCATCGGCAACCTCATCTTCACAAGTTCAAAACGCAGCCATTCCTTCATCTCCACGGCATCGGCGACGATCACCGACCCAGAGAAGACAAGAGACGACGGTGGGTGA 1404 0.5534 MPIPTSRPVHSRQSETGTSIRILHGQERRKIVLLRVTRLLAHARKLELPPHPPILHHQRRVPPGQHEELGSDPEFLERHLRQHRARAAASQVPADEIGLIGDNLDEASVPRARFALAFEQETVHEAERTDRDTMLRHEGEGNGGVQMDIDVEEILVSSEEFLPQGSEREIRVREEQECDFGLGIVGDGMNSGGGATPERVVVEVAGEGGGKMSNTTSPNMNSVSDDNESPSPDLTGYGYYTFGLSIGVLLLFCLITVAMYYFSSRRNPTTDTNETITAAGDHHHHLSPPSRAAAGVDDSTLRSYPAVLYSELAKSWKLQLDDWDWRRGCSICLGDYKESEWVRVLPECSHLFHRNCIDVWLRMNSSCPLCRNSPLPSPIAQVAPLAPWHCKANFLKVVIPLKLSQPPSHGGKCEKFMNPTSASSITRLLLHIIIGNLIFTSSKRSHSFISTASATITDPEKTRDDGG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2731 467 ProSiteProfiles Zinc finger RING-type profile. 329 371 IPR001841 -
Sto8g2731 467 MobiDBLite consensus disorder prediction 210 229 - -
Sto8g2731 467 MobiDBLite consensus disorder prediction 272 297 - -
Sto8g2731 467 CDD RING-H2_PA-TM-RING 329 371 - -
Sto8g2731 467 Pfam Ring finger domain 329 371 IPR001841 -
Sto8g2731 467 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 230 382 - -
Sto8g2731 467 MobiDBLite consensus disorder prediction 208 229 - -
Sto8g2731 467 SUPERFAMILY RING/U-box 322 375 - -
Sto8g2731 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 375 IPR013083 -
Sto8g2731 467 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 230 382 IPR045899 -
Sto8g2731 467 SMART ring_2 329 370 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2731 Sto-Chr8 19409852 19423700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2731 211 386 C3H Transcription Factor Family AT2G35910 39.362 1.00e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2731 - - adu:107466513 150.214