Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2714 ATGGGCTCCGATTTCGTTCTTCCAAAATGGGCATCCACGCCTTGCATCATGGGAATCGACGAAGCTGGCCGAGGACCCGTTTTAgGACCCATGGTGTACGGATGCTTGTACTGTGCTCGCTCGTATCAGAAAACCCTCGCAACTTTGAGTTTTGCTGATTCTAAGACactaaaagaagagaaaagggaagaattatttgataatttaaagGGAAATGAATCAATTGGATGGGACGTTGATGTCTTGGACCCAAAGGAATTATCATCTAAAATGCTAAAGAGGAATAAGATAAATCTGAATGAGATATCGCATCAATCTGCCATGGGCCTGATTGATAGGGTACTAAAGATTGGAGTTCTCTTAACTGAGGTTTACATAGATACAGTTGGAGATCCAGAAAAATATGAAGTGATGCTATCTAAAAATTTCCCGTCTATCAAATTTGTTGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTGAGTGGTGCAAGCATTGTTGCAAAGGTTACAAGAGACAGAGCTTTGCGGGAATGGGTGCTTGATGAGACTGCTGAAAACATGCATAGGAACTTTGGTTCTGGATATCCTGGAGATCCCCAAACCAAGTCCTGGCTAGAACAGCACAAACATCATGTCTTTGGATTCCCATCATTGGTCAGATTCAGTTGGGGAACCTGCACTACATATTCTAAAGATATGGTGGAAGTCTCATGGGAATCTGATAAAATGGATGAAGATGGTGGAAGTGGTGGTAACAGTGGAAAGAGGCAATTGAAATTAAGAAACGTAGGTTTCACAACATCCAAGAAGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGTCGCTGCAAGTTTTTCCAGGCTCGGAAACTTGAACATCTTACTAATTTTTAA 897 0.398 MGSDFVLPKWASTPCIMGIDEAGRGPVLGPMVYGCLYCARSYQKTLATLSFADSKTLKEEKREELFDNLKGNESIGWDVDVLDPKELSSKMLKRNKINLNEISHQSAMGLIDRVLKIGVLLTEVYIDTVGDPEKYEVMLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMHRNFGSGYPGDPQTKSWLEQHKHHVFGFPSLVRFSWGTCTTYSKDMVEVSWESDKMDEDGGSGGNSGKRQLKLRNVGFTTSKKRSEEIESSGKGRCKFFQARKLEHLTNF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2714 298 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Sto8g2714 298 MobiDBLite consensus disorder prediction 242 281 - -
Sto8g2714 298 TIGRFAM TIGR00729: ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
Sto8g2714 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 297 IPR001352 GO:0003723|GO:0004523
Sto8g2714 298 Gene3D - 4 186 IPR036397 GO:0003676
Sto8g2714 298 PANTHER RIBONUCLEASE 7 297 - -
Sto8g2714 298 SUPERFAMILY Ribonuclease H-like 15 231 IPR012337 -
Sto8g2714 298 CDD RNase_HII_eukaryota_like 17 229 - -
Sto8g2714 298 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Sto8g2714 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Sto8g2714 298 MobiDBLite consensus disorder prediction 267 281 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2714 1 298 Core DNA Replication Machinery Family AT2G25100 66.779 3.99e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2714 K10743 - jre:108985733 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2714 8 19220170 19224208 Sto8g2714 8 19220170 19224208 ECH