Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2713 ATGGACATGTCAAATCCTGCAGCATTTGTAAATGGAGAGTTGCTTCCCAATTACATAGGAAAGAGAGTAAGAGCAGTTGTTCAAGTTCTTCAATCCGATGGTGCTGTTACCATTGGAAAATCCACAGATGATCGTCAGCTAACTGTAAGAGGGTTGCCACAAGTTCCTCCTATGAATTATGTTGAGGTGACTGGTATTGCGGAGAACAACCAGTTGATTAATGCTGAGATATGGACAGACTTTGGCAAGAAATTTGACATCAACTCTAACAATATGCTATGCCGACTagcaaatggggaattcaaAAGCCTGTTTCTCTAG 321 0.3894 MDMSNPAAFVNGELLPNYIGKRVRAVVQVLQSDGAVTIGKSTDDRQLTVRGLPQVPPMNYVEVTGIAENNQLINAEIWTDFGKKFDINSNNMLCRLANGEFKSLFL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2713 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Sto8g2713 106 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 106 - -
Sto8g2713 106 SUPERFAMILY Nucleic acid-binding proteins 3 105 IPR012340 -
Sto8g2713 106 Gene3D - 3 106 IPR012340 -
Sto8g2713 106 CDD RPA3 6 105 - -
Sto8g2713 106 Pfam Replication factor A protein 3 3 100 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2713 Sto-Chr8 19210088 19212080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2713 1 106 Core DNA Replication Machinery Family AT4G18590 59.434 1.61e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2713 K10740 - gmx:100306197 158.303