Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2666 ATGTCTACTTCCTGCTTCGGGCAACACAATGCCTATGTAGCCCACAAGCATATCATTTCTGTGATTCTGTCATTTTGTGTTGATTATATTGTCCTTACAAGTGTAGATCGTGATGATATACCAGATGGAGGAAGTGGGCATTTTGCTCAGACTGTCAAAGCAATGAAGAGAGGCATCAAGAAGAAGGCAAAAGAGCAACTCAGTGTTCTTTGTGATGTTGATGTTGTTGCTATTGCTTACGATGCCCTCTCCGATCCTCATTCCGAGGTCTGGCCAGATGATCCAGGAGTCCATGGGTTTCTTGACAAGTATCATGGTAGGCCAGTGTTGGAGAATACCTTGAACCAAGAAGAGTTAATCCAGAAGAGGCTTCACAAGGTgaaagaatacttgaagaagcGATCTAATGAGAACTTCGAGGAAGAAATATCTCAGCTCATGATCAACTATATGGCTGGGTATGCAGATCCGACCATTGTGTCAGAGAATGCACTTCATTTGAAGATGTTGGTTGAGCAGAATTTGAAGGAGATCGATAGGGTGATGGAGGAATCTGGGAAAGAGGATGAAGTGTGTGTTCCAGTAGCTCCACCAATGTGTGAGGAGGGATTGTTGATCAATGGAGAAAATGAGAATGGCCAGACTCTGCATCATCATGACATGGGATCTGGAAATTGGAATAGCCCATCATCATGCTGGAATGACTTGGAGGATTTGGAATACTATATGGGATTTGGTTCATCTGAAATGCCTTAA 756 0.422 MSTSCFGQHNAYVAHKHIISVILSFCVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKRGIKKKAKEQLSVLCDVDVVAIAYDALSDPHSEVWPDDPGVHGFLDKYHGRPVLENTLNQEELIQKRLHKVKEYLKKRSNENFEEEISQLMINYMAGYADPTIVSENALHLKMLVEQNLKEIDRVMEESGKEDEVCVPVAPPMCEEGLLINGENENGQTLHHHDMGSGNWNSPSSCWNDLEDLEYYMGFGSSEMP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2666 251 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 50 208 - -
Sto8g2666 251 SUPERFAMILY SRF-like 52 128 IPR036879 GO:0003677|GO:0046983
Sto8g2666 251 Gene3D - 50 145 IPR036879 GO:0003677|GO:0046983
Sto8g2666 251 PANTHER SERUM RESPONSE FACTOR HOMOLOG 50 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2666 Sto-Chr8 18802734 18804073 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2666 65 198 MADS-box Gene Family AT5G26630 27.660 7.44e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Sto8g2666 SRF-TF 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2666 - - nto:104102159 85.1149