Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2646 ATGGATCAAACATATTCTCCCTCCGATCTAGTGTTCACGGTGAGGAGGAGGCAACCAGAATTAGTGGCTCCTGCTAAGCCTACTCCCCGTGAGTTTAAACTACTTTCCGACATAGATGATCAAGATGGACTTCGTTGTCAAGTTCCACTCGTTCACTTTTACCCTTCCCGCCCTTCCATGGCAGGCAAGGACCCGGTCCATCTCATAAGACAGGCTCTTACTGAAGCCTTAGTGTTTTACTACCCACTCGCTGGTCGACTCCGTCGAGCTCCGGCATGCAAACTCGTGGTGGATTGTAGTGCGCAAGGCGTACTATTCGTTGAGGCCGAGGCCGATGTTACACTTTCCCAATTCGGCCGCCAGCTTCAACCTCCATTCCCATGCTTCCAACAACTTCTTTGTAAAGTTCCTGGCTCGGAAGGAATCATTGATTGTCCCCTCCTACATATACAGGTTACACGGCTCAAGTGCGGGGGTTTCATCTTGGCCCTCCAAATGAACCACACCATGTGTGACGGTCCAGGTATTGTCCAATTCATGAAAGCCTTAGGCGAGATAGCCCGCGGTGCTTCCGAACCTTCTATTCAGCCAGTGTGGCTCAGGGAACTCCTAAATGCAAGAGACCCACCCCGTGTTACGTGCACCCATTACGAATACGAGCAAGTCGCAGTGCCACCTGACGATGTCATAGAAGAAACCCAAGACATGGTTCAACGCTCTTTCTTCTTCGGGCCCACCGAGCTGAGAGAGGTGGATTTTGGGTGGGGCCAGGCGGTGTTTGCTGGAGTAGCCAAGGCTATTACGTTTCACATGAGAATGCACAAGGGGAGGAAGGTGAAAAACACAAAGTACACAAGACTTTGCAGGACGAAGAAGATATTGACTGTAAATGGGAAATTTCCAGGGCCAACCTTATATGTCACCAAAGGAGAAACTATAATTGTTGATGTTTATAACAAAGCCAACTACAATATAACCCTCCACTGGCATGGAGTAAAACAACCAAGATATCCATGGTCTGATGGACCAGAGTACATCACACAATGCCCTATTGGTGAGTGGTGGAAGAGTGATATTAGTGAGGTTTACAATGAATTTCGTAGAAGTGGACAAGGCCCCAATACTTCAGATGCTTTTACTATTAATGGCCAACCTGGTGATCAATATCCATGCTCAAAGCCTGAAACTTTTAAACTGACGGTTGAACAAGGCAAAACCTATCTTCTCCGAATGGTGAATGCCGCAGTGGACAGCAATCTATTCTTCGCCATAGCAAAACACAAACTCACCATAGTAGGAACAGATGGAAGCTACACAAAGCCATTGAAAGTAGACTACCTCACCTTCTACCCTGGACAAACCATGGATGTCTTACTAGAAGCAAACCAAGCACTAGACCATTATCACATGGCCACCACAACTTACTCCAGCACAGCCAATTCCGACTCTGACAACACCACTTCCACTGCCATTATTCAATACAAAGGAAGAAACTTCATCCCATCAAACACCACACTGCCTccttccttcccttcccttccaacCCCCAATAACACCAATGCCTCCATCAACATCATAAGCAAACTCAGAAGCTTGGCCAGTGAGGAACACCCCATTGATGTGCCATTGGAGATAAGCACACGACTGTTCTTCACACAATCTGTGAATTCCTTGAACAGTTCTCGTCTGGCGGCTAGCATGAACAACATAAGCTTTGATTTGCCTTCAAGGAGTAACATCTTGGAATCTTACTATAGAAACATCAGTGGGGTGTATGGGGAGAATTTCCCGGATTTGCCTCCTCTGTTGTTTGATTTCACAGGTGATGATTTGCCTTCGGTGTTGGAGACTCCTTCTGTTGGCACAGAGGTGAAGGTGCTTGAGTATGACTCTAGTGTGGAGATTGTTCTTCAGGGGACTAACGTGTTTGCTGGGACAGAACATCCTATGCATTTGCATGGACAGAGTTTCTATGTTGTGGGATGGGGGTTTGGAAACTTTGACAGAGATAAGGATCCTTTGAACTATAATCTTGTTGACCCTCCTCATCAGAATACTATTGCCATACCCAAAAATGGTTGGGTCACTATCAGATTCAGGGCTGAAAACCCAGAACGCCATGTGACTTGGGGAATGGCTATGACTTTCATTGTAAAGAATGGTAACAATCCAGAAGAGCAGATGCTGCCACCACCTCCTGACATGCCACCATGTTATTAA 2220 0.4608 MDQTYSPSDLVFTVRRRQPELVAPAKPTPREFKLLSDIDDQDGLRCQVPLVHFYPSRPSMAGKDPVHLIRQALTEALVFYYPLAGRLRRAPACKLVVDCSAQGVLFVEAEADVTLSQFGRQLQPPFPCFQQLLCKVPGSEGIIDCPLLHIQVTRLKCGGFILALQMNHTMCDGPGIVQFMKALGEIARGASEPSIQPVWLRELLNARDPPRVTCTHYEYEQVAVPPDDVIEETQDMVQRSFFFGPTELREVDFGWGQAVFAGVAKAITFHMRMHKGRKVKNTKYTRLCRTKKILTVNGKFPGPTLYVTKGETIIVDVYNKANYNITLHWHGVKQPRYPWSDGPEYITQCPIGEWWKSDISEVYNEFRRSGQGPNTSDAFTINGQPGDQYPCSKPETFKLTVEQGKTYLLRMVNAAVDSNLFFAIAKHKLTIVGTDGSYTKPLKVDYLTFYPGQTMDVLLEANQALDHYHMATTTYSSTANSDSDNTTSTAIIQYKGRNFIPSNTTLPPSFPSLPTPNNTNASINIISKLRSLASEEHPIDVPLEISTRLFFTQSVNSLNSSRLAASMNNISFDLPSRSNILESYYRNISGVYGENFPDLPPLLFDFTGDDLPSVLETPSVGTEVKVLEYDSSVEIVLQGTNVFAGTEHPMHLHGQSFYVVGWGFGNFDRDKDPLNYNLVDPPHQNTIAIPKNGWVTIRFRAENPERHVTWGMAMTFIVKNGNNPEEQMLPPPPDMPPCY 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2646 739 SUPERFAMILY Cupredoxins 351 515 IPR008972 -
Sto8g2646 739 Pfam Multicopper oxidase 600 720 IPR011706 GO:0005507|GO:0016491
Sto8g2646 739 SUPERFAMILY Cupredoxins 550 738 IPR008972 -
Sto8g2646 739 Gene3D - 10 221 IPR023213 -
Sto8g2646 739 PANTHER MULTI-COPPER OXIDASE 352 738 IPR045087 -
Sto8g2646 739 PANTHER MULTI-COPPER OXIDASE 263 351 IPR045087 -
Sto8g2646 739 Gene3D - 350 534 IPR008972 -
Sto8g2646 739 SUPERFAMILY Cupredoxins 279 354 IPR008972 -
Sto8g2646 739 CDD CuRO_2_LCC_plant 351 494 IPR034285 -
Sto8g2646 739 Gene3D - 262 349 IPR008972 -
Sto8g2646 739 Gene3D - 541 739 IPR008972 -
Sto8g2646 739 Pfam Multicopper oxidase 351 496 IPR001117 -
Sto8g2646 739 Pfam Transferase family 14 247 - -
Sto8g2646 739 PANTHER LACCASE 352 738 - -
Sto8g2646 739 PANTHER LACCASE 263 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2646 Sto-Chr8 18623579 18642156 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2646 17 220 Monolignol Biosynthesis Gene Families AT5G48930 38.350 7.32e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2646 K05909 - pop:7492505 576.63