Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2638 ATGATGGTGGCATCGGACTCTTCTCCTGAGTGTTTAAGCAAGGTGATGGGGTCGGACTCTTCCTCGGAGTGTTTCAGCAAGGTGATGGCGTCGATGCCGGGGTTTCGATTCCATCCCACCGACGAGGAACTGATCATGTACTATCTGAAAAGGAAGATGTGTAGGAAGAAGCTGAAACTCGATGTAATTCGTGAGACCGATGTCTATAAGTGGGATCCCGAGGAATTGCCTGGTATTTGCTTTGCTCTCGGGCTTATCTTTGCTGGTAATTTCTGGCTGGATATGATTGACGAAACATTATCCGGGGGACAATCAGTGCTAAAAACTGGAGATAGGCAATGGTTCTTTTTCACCCACAGAGATAGAAAATATCCTAATAGTGCAAGGTCTAATCGAGGAACTAGACATGGGTACTGGAAAGCAACAGGAAAGGATCGTAACGTGATATATAATTCTCGGACAGTTGGAGTGAAAAAGACACTGGTATTCTATAGAGGTAGAGCACCAAATGGTGAGCGAACTGATTGGGTTATGCACGAGTACACCCTTGAAGAAGAAGAGCTGAAAAGATGCCAGGGTTTTAAGGACTATTATGCACTTTACAAGGTCTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTAAAGAAGAAGAGTGGGTAGATGATGACTTAAtagattttaatataaattcagcTGAGAAGGAGGCTCCAATTTCACAACTTGACAATGGTACTTCTGTTGATACCGTCACTTTTAATAATCAAGTGCAACCATTGTTTGATGATGATATTGATGAGATCTTGAAAAAAATGATGGATGAGCATGTTCCTGACCAGCCATTTTATCCTGCCTTACCACAGGTTGCTGCTGAAGAAACACAAAGTATTGTGGTTGATCAATTCTCTAGGGAGTCAATTTTCGATGAGCCAATCaaaatgtttcattcaagtGGTCTGCAAAGTGATGTGCAGCACAGCCACGACCTCACTCAATCCGCTACCTCACACTTACATGTTTCGGAAGCACCCGAGGTCACTTCTGCTCCCATCATTCAAGCAGAGGAGCCTCACCTTCATGAGGACGACTTCCTGGAAATTGATGATCTTATTGGTCCTGAACCAACAGTGTCAAACATAGAAAACCCTTCAGAGAACCTGCAGTTTGAAGATGGATTAAGTGTCCTTGACCTGTATTATGATGCGGAGATGTTTTTACGTGACATGGGGCCTGTTGATCAGGAAGCTATTTCACATCCATATATGAATACTTTTGACAGTAATATTGTAAATCAGCATTATCAGTCGCAGCTCATTGGAGAGGATGCAAATCAGACTGGTGGAGAATTCTGGATGCATGAACAAAGGCACATCCTGAGTCCAGCAGAACATACCAATGGTTCTTTCCCTCTACCAACCTCAGGTGTGGTTTGTGAATCTGCCAGCTTGCCTGCTGAAGGCAATCATAATCAAAGTAGCAGCCCAATGGGAGATGTTGCTACTAGTAGATTCTCTTCTGCTCTCTGGGCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCGGCCGAAAATGCAAATCGGGCTTTTGAGAGGATGTCTAGCTTTGGTAGAGTGAGAATTAATATCAAGCAGGCAAAccttgctgctgctgctgccgCCGCTGCCGCTGCAGGTAATGACACTGCTACTATGAAGAGATCAGGCAGAAGAAAGGGAGTTTTGTTCCTTTTCCTGCCTGTTCTTGTTGCTTTATGTGCTTTCTTATGGGTTTCTTTAGGAACATTGAGACTATTTGGGAGATCCATCTCTTGA 1833 0.4255 MMVASDSSPECLSKVMGSDSSSECFSKVMASMPGFRFHPTDEELIMYYLKRKMCRKKLKLDVIRETDVYKWDPEELPGICFALGLIFAGNFWLDMIDETLSGGQSVLKTGDRQWFFFTHRDRKYPNSARSNRGTRHGYWKATGKDRNVIYNSRTVGVKKTLVFYRGRAPNGERTDWVMHEYTLEEEELKRCQGFKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWVDDDLIDFNINSAEKEAPISQLDNGTSVDTVTFNNQVQPLFDDDIDEILKKMMDEHVPDQPFYPALPQVAAEETQSIVVDQFSRESIFDEPIKMFHSSGLQSDVQHSHDLTQSATSHLHVSEAPEVTSAPIIQAEEPHLHEDDFLEIDDLIGPEPTVSNIENPSENLQFEDGLSVLDLYYDAEMFLRDMGPVDQEAISHPYMNTFDSNIVNQHYQSQLIGEDANQTGGEFWMHEQRHILSPAEHTNGSFPLPTSGVVCESASLPAEGNHNQSSSPMGDVATSRFSSALWAFVESIPTTPASAAENANRAFERMSSFGRVRINIKQANLAAAAAAAAAAGNDTATMKRSGRRKGVLFLFLPVLVALCAFLWVSLGTLRLFGRSIS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2638 610 Pfam No apical meristem (NAM) protein 33 183 IPR003441 GO:0003677|GO:0006355
Sto8g2638 610 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 103 610 - -
Sto8g2638 610 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 28 80 - -
Sto8g2638 610 Gene3D NAC domain 40 208 IPR036093 GO:0003677|GO:0006355
Sto8g2638 610 ProSiteProfiles NAC domain profile. 31 206 IPR003441 GO:0003677|GO:0006355
Sto8g2638 610 PANTHER NAC TRANSCRIPTION FACTORS 2 28 80 - -
Sto8g2638 610 PANTHER NAC TRANSCRIPTION FACTORS 2 103 610 - -
Sto8g2638 610 SUPERFAMILY NAC domain 28 206 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2638 Sto-Chr8 18553859 18557259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2638 16 609 NAC Transcription Factor Family AT1G34190 44.249 8.78e-150 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g2638 NAM 2.5e-34 No_clan