Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2613 ATGGGAAATATTGTTCCTTCTAATGTTACCCCTTCTCTGTTATTTTCTCTATTCTTCTTATGGCTGACCATGACAAAGATAGAAGAAGTGACCTGTCTTTCACCTGATGGACAAGCCCTCCTTTCCCTTATTTCTGCATCTGACCCTTCTGCAAAGTCATCCTCTTCTGTTCTCTCCACATGGAGCCCATCAAGCTCAACACCTTGTTCATGGCATGGCATAACTTGCTCTCCACAAGGAAGAGTCATCTCCCTTTCTATACCAGACACTTTTCTCAACCTTTCCTCTTTACCTTCGCAGCTTTCTACTTTATCATCTCTACAACTTCTCAATCTGTCTTCTACTAATATATCTGGTTCCATCCCACCTTCTTTTGGCCAACTCTCCTACCTTCGTCTCCTTGACCTCTCTTCAAATTCTCTCACCGGTTCCATTCCTGAAGAGCTCGGCAAGCTCGCGTCGCTTCAATTCCTTTTCTTGAACTCCAACAGATTGTCTGGGAGGATTCCTCAGCAGCTTGCTAATCTTACTTCACTCGAAGTTCTCTGCCTCCAAGACAATCTCCTTAATGGATCAATACCATCACAGTTAGGCTCTTTGACATCTCTACAACAGTTTCGGATTGGAGGAAATCCATACCTAAGTGGAGAAATTCCATCACAGTTGGGACTTCTCACCAATCTCACCACATTTGGGGCTGCAGCTACCGGGCTTTCAGGTGTTATACCCTCTACATTTGGAAACTTGATCAATCTCCAAACCTTAGCGCTTTACGATACAGAAGTTTCTGGTTCCATCCCACCAGAGCTTGGCCTGTGTTCTGAGCTAAGAAATCTGTATTTGCACATGAATAAGCTGACTGGTACTATCCCACCTCAACTGGGTAAGTTGCAAAAGCTTACTAGCTTGCTTCTTTGGGGTAATGCATTATCTGGGTCAATCCCTTCTGAGATTTCCAATTGTTCATCACTTGTTGTTTTTGATGTCTCTGCCAATGAACTTTCGGGTGTAATTCCGGGCGATTTTGGGAAGCTGGTGGTTTTAGAACAACTTCATCTATCAGACAATTCACTCACAGGGAAAATACCATGGCAGTTGAGCAACTGCACTAGTCTTGCTACTCTTCAGCTTGACAAAAACCAGTTATCAGGTACTATTCCATGGCAGGTTGGGAGATTGAAGTATTTGCAAAGTTTTTTCTTGTGGGGCAATTCAGTGTCTGGAACCATACCATCCTCTTTTGGAAACTGCACTGAACTATATGCACTTGACCTTTCAAGGAACAAGCTGACAGGTTCCATTCCAGACGAAATTTTCGGCTTGAAGAAACTGAGTAAGCTTCTACTTCTGGGAAATTCCCTATCTGGTGAATTGCCACCAAGTGTTGCCAATTGTGAGTCTCTTGTGAGGTTGAGGCTTGGAGAAAACCAGCTCTCAGGACAGATTCCTAAAGAGGTAGGTCAACTGCAGAATCTGGTGTTCCTTGACTTGTACATGAACCATTTCTCAGGAAGTTTACCGGTAGAGATTGCAAATATCACAGTTCTTGAGCTTCTAGATGTGCATAATAATTACATTTCTGGGGATATCCCATCTCAGCTTGGGGAGCTTGTAAACTTAGAGCAGTTAGATCTCAGTCGAAACAGTTTGACAGGTGAAATTCCGTGGAGCTTTGGAAACTTCAGTTACTTGAACAAGCTCATTctcaacaataatttactcacaGGGTCAATCCCAAAATCCTTTAGAAACTTGCAGAAGTTAACTCTACTGGATTTGAGTTACAATAATTTCTCTGGTGACATTCCATCAGAAATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCCGAGTCAATGGCTAGTTTGACACAATTACAATCACTTGATCTTTCTCATAATATGCTTTATGGAAGAATTAAGGTTCTGGGTTCCCTCACCAGTCTCACTTCCCTCAATATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCTTTCTTCAGAACTCTATCTTCAAATTCATATCTTCACAACTCCCATCTTTGTGAGTCCCTTGATGGAACCACATGTTCAAGCCTGCTTCGAAAAAATAGTTATAAATCTGCCAAAACCATAGCTTTGATATCAGTAATTCTTGCCTCAGTTACCATAGTTGTCATTGCATCATGGATTCTAGTGACACGTAGTCACAAGTACATGGTTGAGAAATCTTTGGGGACGTTGGCATCTTCATCAGGAGCTGAGGATTTTTCTTATCCTTGGACTTTCATTCCATTTCAAAAACTAAACTTCAGCATAGATAATATCTTGGATTGCTTGAGGGATGAAAATGTGATAGGAAAAGGTTGCTCTGGAATTGTATATAAGGCAGAAATGCCTAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAAAGAGGAAGAAATGGTGGACTCATTCGCTGCAGAAATTCAGATTCTCGGGCACATCCGACACAGGAACATTGTGAGGCTCCTAGGTTATTGCTCTAACAGAAGTGTTAAGCTTCTTCTCTATAACTACATTTCAAATGGCAACCTCAGACAGCTGTTGCAAGAGAACAGGTACCTAGACTGGGAAACTAGATACAAGATTGCTGTTGGGTCAGCTCAGGGTCTAGCATACCTTCATCATGACTGTGTGCCAGCAATTCTTCATAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAAGCATATCTTGCAGACTTTGGTCTTGCCAAGCTGATGCATTCACCAAATTATCACCATGCAATGTCCAGAGTTGCTGGATCCTATGacATTTTAATGACTATTGCAGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTATTGCTGGAGATACTAAGTGGAAGAAGTGCTGTTGAATCCCACGTTGGAGATGGGGTACACATAGTTGAGTGGATCAAGAGGAAGATGGGAAGCTTTGAGCCTGCAGTGTCAATTCTAGACACAAAGCTCCAAGGCCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTAGGGATCGCTATGTTCTGCGTGAACTCTTCACCGGCCGAGCGGCCCACCATGAAGGAAGTGGTGGCCCTACTAATGGAGGTGAAGAGCCCACCTGAGGAGGCGGGGAAGACATCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGTTAG 3258 0.4242 MGNIVPSNVTPSLLFSLFFLWLTMTKIEEVTCLSPDGQALLSLISASDPSAKSSSSVLSTWSPSSSTPCSWHGITCSPQGRVISLSIPDTFLNLSSLPSQLSTLSSLQLLNLSSTNISGSIPPSFGQLSYLRLLDLSSNSLTGSIPEELGKLASLQFLFLNSNRLSGRIPQQLANLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLSGEIPSQLGLLTNLTTFGAAATGLSGVIPSTFGNLINLQTLALYDTEVSGSIPPELGLCSELRNLYLHMNKLTGTIPPQLGKLQKLTSLLLWGNALSGSIPSEISNCSSLVVFDVSANELSGVIPGDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLATLQLDKNQLSGTIPWQVGRLKYLQSFFLWGNSVSGTIPSSFGNCTELYALDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPPSVANCESLVRLRLGENQLSGQIPKEVGQLQNLVFLDLYMNHFSGSLPVEIANITVLELLDVHNNYISGDIPSQLGELVNLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNLLTGSIPKSFRNLQKLTLLDLSYNNFSGDIPSEIGYVTSLTISLDLSSNAFTGEIPESMASLTQLQSLDLSHNMLYGRIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYLHNSHLCESLDGTTCSSLLRKNSYKSAKTIALISVILASVTIVVIASWILVTRSHKYMVEKSLGTLASSSGAEDFSYPWTFIPFQKLNFSIDNILDCLRDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEEEMVDSFAAEIQILGHIRHRNIVRLLGYCSNRSVKLLLYNYISNGNLRQLLQENRYLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMHSPNYHHAMSRVAGSYDILMTIAEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGVHIVEWIKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEAGKTSQPLIKQSSNQS 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2613 1085 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Sto8g2613 1085 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Sto8g2613 1085 SUPERFAMILY RNI-like 110 512 - -
Sto8g2613 1085 Gene3D Phosphorylase Kinase; domain 1 763 863 - -
Sto8g2613 1085 PANTHER UNNAMED PRODUCT 13 1081 - -
Sto8g2613 1085 SMART LRR_typ_2 585 609 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 537 560 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 489 512 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 297 321 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 417 441 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 634 661 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 152 175 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 345 369 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 176 200 IPR003591 -
Sto8g2613 1085 SMART LRR_typ_2 104 128 IPR003591 -
Sto8g2613 1085 MobiDBLite consensus disorder prediction 1065 1085 - -
Sto8g2613 1085 SMART serkin_6 786 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 194 287 IPR032675 -
Sto8g2613 1085 PRINTS Leucine-rich repeat signature 131 144 - -
Sto8g2613 1085 PRINTS Leucine-rich repeat signature 634 647 - -
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 579 705 IPR032675 -
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Sto8g2613 1085 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Sto8g2613 1085 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Sto8g2613 1085 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515
Sto8g2613 1085 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Sto8g2613 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 387 482 IPR032675 -
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 483 578 IPR032675 -
Sto8g2613 1085 Gene3D Ribonuclease Inhibitor 288 386 IPR032675 -
Sto8g2613 1085 SUPERFAMILY Protein kinase-like (PK-like) 768 1061 IPR011009 -
Sto8g2613 1085 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Sto8g2613 1085 Pfam Protein tyrosine and serine/threonine kinase 789 1059 IPR001245 GO:0004672|GO:0006468
Sto8g2613 1085 ProSiteProfiles Protein kinase domain profile. 786 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2613 1085 Gene3D Transferase(Phosphotransferase) domain 1 864 1080 - -
Sto8g2613 1085 SUPERFAMILY L domain-like 441 696 - -
Sto8g2613 1085 PANTHER - 13 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2613 Sto-Chr8 18364640 18368064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2613 30 1064 Receptor kinase-like Gene Family AT5G56040 45.229 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto8g2613 PK_Tyr_Ser-Thr 7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2613 - - ccaj:109812175 1774.21