Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2595 TTGGCTACTGTCGAGGCTCAGTCGCAAATGGTGGAGCACACAGAAGAGGAGCAAGTAGTGGTAGCCTGGTTCCTGGCCACTAATTGTTTGAAAATGGGTGATGCTCATGAGACTGATAAGAACATTGAGGTATGGAAAATCAAGAAGTTGATCAAAGCCCTTGAGGCTGCTAGAGGAAACGGGACGAGTATGATTTCCCTTATCATGCCCCCACGTGATCAAATATCTCGTGTTACAAAGATGCTTGGTGATGAGTTTGGAACTGCTTCAAACATAAAAAGCAGGGTGAATAGACAGTCTGTGCTTGGTGCTATCACATCTGCCCAGCAGAGGCTTAAGCTCTACAACAAAGTTCCTCCAAACGGGCTTGTTCTGTATACGGGTACAATTGTGACCGAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGGCCTATAAATGCTTCTCTCTACCTTTGTGACAACAAGTTCCATACAGAAGCTTTAAATGAGCTGCTAGAGTCTGATGACAAGTTTGGATTTATAGTTATGGATGGTAATGGTACTCTTTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTCCCAAAGAAACATGGAAGAGGGGGTCAATCAGCTCTAAGGTTTGCCCGTCTTCGCATGGAAAAGCGTCATAACTATGTGAGAAAGACTGCAGAGCTTGCAACACAGTTCTATATAAACCCTGCCACCAGTCAGCCTAATGTATCTGGTTTAATTCTGGCGGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTTAATGTTGTAGATGTATCTTATGGAGGGGAGAACGGCTTTAATCAGGCTATTGAACTATCTGCAGAGATTCTGTCAAATGTTAAGTTTATCCAGGAAAAACGCTTGATTGGAAAATACTTTGAGGAAATTAGCCAGGATACTGGAAAGTACGTATTTGGGATTGACGATACTCTAAAAGCTCTGGAGATGGGGGCTGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGATTTGTCTTAAAACATAGCACTACTGGTGAGCTTGTTACTAAGCATTTTAACAAGGAGCAGGAGGCCAACCAGGATAATTTTCGGGATACTGCCAACTCTGCTGAATACGAGGTTCAGGAAAAGATTTCACTACTGGAGTGGCTTGCAAATGAGTACAAACGGTTTGGTTGCACACTTGAGTTTGTGACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGGGGTTTTGGTGGAATAGGGGGGATCCTGCGTTACCAGCTTGATATGAGAACATTTGATGATTTCTCTGATGATGGAGAagtggatgatgatgatgaatag 1407 0.4179 LATVEAQSQMVEHTEEEQVVVAWFLATNCLKMGDAHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGIDDTLKALEMGAVETLIVWENLDMNRFVLKHSTTGELVTKHFNKEQEANQDNFRDTANSAEYEVQEKISLLEWLANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDGEVDDDDE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2595 468 Gene3D eRF1 domain 2 167 308 IPR042226 -
Sto8g2595 468 Gene3D - 310 467 IPR029064 -
Sto8g2595 468 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 32 467 IPR004403 GO:0003747|GO:0006415
Sto8g2595 468 Gene3D eRF1 domain 1 30 166 IPR024049 -
Sto8g2595 468 Pfam eRF1 domain 3 312 449 IPR005142 -
Sto8g2595 468 SUPERFAMILY Translational machinery components 173 307 - -
Sto8g2595 468 Pfam eRF1 domain 1 49 169 IPR005140 -
Sto8g2595 468 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 44 448 IPR004403 GO:0003747|GO:0006415
Sto8g2595 468 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 37 171 IPR024049 -
Sto8g2595 468 SMART eRF1_1_2 35 171 IPR005140 -
Sto8g2595 468 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 32 467 - -
Sto8g2595 468 SUPERFAMILY L30e-like 309 451 IPR029064 -
Sto8g2595 468 Pfam eRF1 domain 2 175 308 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2595 Sto-Chr8 18186053 18188944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2595 32 467 Eukaryotic Initiation Factors Gene Family AT5G47880 88.761 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2595 K03265 - gmx:100785916 795.038