Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2567 ATGGATCAGAAAACATTGGAAGAAGGTGGAAAAAATACTTTGAATTTTAAGTGTGAGAAGATCCTTCATGGATGTGAGAAACCTATTGCTTGTCAGACACCGGAGAAGACTAGCGAGCAAACTACCAAATCCAAGGAGGGAACGATCCAGCTTCCAGAAAAatACAAGGCTATAGCGGATTTATTTGACCGCATGAGTTGTTCCCTGAGGTTACTTCGTCTGCGTAAAAAATCtccaacttttcgaaacatttgTACCCAGGTTGAAATTCTTGCCAAAAGAGAATTCTCGTACATGCATCTTGCCCAGATAAAGTATATACTTCCTGAAGCCGTACACATAGACAAGGTATTAGTACATGACAATAAAACCTTGTGTATGAAGCCTGATCTGAAAATCGCCTTGATAGCTGAGGTTGTGCAAGGACACTCTAGTGAATCTACTGATATGGCTCTTCGGGAACTCTTTGGTTTAAGACTAACTGACTTCTTCAATATGCATCCTCGGGGTACTGATATTCCAGAAGCTCCACTGCCAGAACCTTTTCAACAAAGAACTCATAACTTGATTTGCGAGGATTTGCTTGTTGATTCTTCTGCAATGGTCTCATCATCAACATCCAGTGAAAATCAACAATTATCAAAGGAATGTCATCCATATCCTCTTAAAAGGCATTTCTCAAAGAAGAATGTTGTGGTAGAGACAGAAAAGATCCAGTGCTTTTTAGAAAATCAAACTGCACCGTCAAGTCAGTTGTCTAATTGTAATTGCCTGGATAATGAAGGAAATGAAAGTGAAGGTAAATGGCAGAAGAAATGTGCTACTTCCTGTTTGGAATCTGATAGAACGATTAATCAGAATATGGAAAGAGggcagcagaaggaatcatgtTTTGAGTGTTTTCAACCTAGTGTTATTAATACACCAGCACATCTCATTTGCTCTCCAAAGTCTGATAGTTGCGATGGTCTTGAAGGGCCTAACATCAAGATTGCCTCATCCATTGATATATCAATCACAGAGACACCCGCACAGTCAGCACCAAGAAGATTGGTGCCCAGTTCTGATGATAAACATCAGATTATGACTACTCAAAATTCAATTTCATGTAATAAGTCTGCAAAAAGAGTTCTTGACTTTTCACACGAGGAAGGTGATAATAATGCACTGGACATCAGTATAGACACACTTGAGTCTAGCAGAGATGCGCATGATAACATCCCTGAAGCTAGTAGAGAATGTACCGAGGGTCTTAATGCTTCTAGTTCTGTTTTTATGCCCCAGAAGGTGGAAGAGAGCCATGATTGTTCTCATGACAATACAAACCAAACTCAGGGTGGTTCAGCAACATGGCAGCACATGTCTTTGCCGTTGCTCGGCCTGGTTGATGTGATATACTCAATATTTTCTTCTGTGAAATGCTCTCCAATCACAAAAGAGGAGCTCCTGCACAAGATAATTATGAACAGTTTAGATTTTGTTGAGATAAGAGAAGTTGAAGAAGGGATTGAATTTCTTGAAAAGGTGGTACCAGACTGGATATGCAGGAAGCAGGTTCCTAGTGGAGATACTATGTACTGCATGAAGAAAGCGTGGGATTTGGACTCTGTTCGATCAAGGCTGTCTAGCAATATAACTCCTGAGTTAAGTAAAGGCTTGTCCTTTACTCAGATTTAA 1677 0.3906 MDQKTLEEGGKNTLNFKCEKILHGCEKPIACQTPEKTSEQTTKSKEGTIQLPEKYKAIADLFDRMSCSLRLLRLRKKSPTFRNICTQVEILAKREFSYMHLAQIKYILPEAVHIDKVLVHDNKTLCMKPDLKIALIAEVVQGHSSESTDMALRELFGLRLTDFFNMHPRGTDIPEAPLPEPFQQRTHNLICEDLLVDSSAMVSSSTSSENQQLSKECHPYPLKRHFSKKNVVVETEKIQCFLENQTAPSSQLSNCNCLDNEGNESEGKWQKKCATSCLESDRTINQNMERGQQKESCFECFQPSVINTPAHLICSPKSDSCDGLEGPNIKIASSIDISITETPAQSAPRRLVPSSDDKHQIMTTQNSISCNKSAKRVLDFSHEEGDNNALDISIDTLESSRDAHDNIPEASRECTEGLNASSSVFMPQKVEESHDCSHDNTNQTQGGSATWQHMSLPLLGLVDVIYSIFSSVKCSPITKEELLHKIIMNSLDFVEIREVEEGIEFLEKVVPDWICRKQVPSGDTMYCMKKAWDLDSVRSRLSSNITPELSKGLSFTQI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2567 558 CDD Cdt1_m 33 187 IPR014939 -
Sto8g2567 558 SMART CDT1_2 51 180 IPR014939 -
Sto8g2567 558 Gene3D - 450 548 IPR038090 -
Sto8g2567 558 PANTHER EXPRESSED PROTEIN 11 543 - -
Sto8g2567 558 SUPERFAMILY "Winged helix" DNA-binding domain 38 182 IPR036390 -
Sto8g2567 558 PANTHER DNA REPLICATION FACTOR CDT1 11 543 IPR045173 GO:0003677|GO:0030174|GO:0071163
Sto8g2567 558 Pfam DNA replication factor CDT1 like 51 115 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2567 Sto-Chr8 17921566 17926590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2567 339 554 Core DNA Replication Machinery Family AT2G31270 27.778 3.35e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2567 K10727 - gmx:102670055 506.523