Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2562 TTGGCCTTCTTCTACAGGAGCTGCTTGTGCCTTGGGTTCTTGTCGTTTCTATTAGTGAACTTGGTTGTTCCTGAGTATTATCCAGAAGAGAGAGAAGCTCTGTTACTTCTGATAAATTCCTTAACTTCTGCTTCTAATTTACATGGGAACTGGACAGGACCACCTTGTATAGCCAATCAGAGTAGATGGGAAGGTATCACTTGTTCAAATTGGCATGTTGTTCACATTGCCCTTGAAGGAATCGAGCTTCTCGGCTCTTTGCCGCCTACATTCTTACAAAACATAACATTCTTGACACAAGTTAACCTCAGAAACAATTTAATTTATGGGAACCTACCAAACCTCACAAATCTGATGTTCTTGGAACATGTTTTGCTCTCATATAATCGCTTCTCAGGATTGATTCCTATAGAGTATGTTGGACTGCCTAGGCTGAAAGAACTGGAGCTGCAAGAGAATCACTTGGATGGTCAAATCCCACCCTTTGATCAAACATCATTGATAAATTTCAATGTCTCTTATAATCATCTGGTAGGACCAATACCTCAAACATCTGTGCTAATGAAGTTCCCGAAGAGCTCCTTTGTTAATAATTCAGGTCTCTGTGGGAAGCCATTGGATAAGCCTCCTGCCCCTTTTCCTGCACCACCTCCTGCAATTATTATTCCTCCAAGCCCAGCAAAAGAAGAACAAAGGAAGAGACTCCATGTATGGGCTATTGCTTTGATTGCTGCAGCAGCTGTACTGATCCCTCTTCTGGTTATTACTGCTTTCTTGTTCTGTAAAACAAGGGCACATGGAAAAGAAACAACAAGAAATGAATCTGCAGGGTATGGTTTTAGAGCATGGGCAGAGAATATAATGTCCCATTCAGTAAGCACTGAAGATCCTGAAAGATCAAGCAGAATGGAAATTTTCACCAAGGAATTACCAGTTTTTGACTTGGATGACTTATTAAGGGCATCAGCAGAAATGCTAGGGAAAGGAAATTTAGGCACTACATATAAAGCAACTCTTGAAACTGGTGCTGTTGTAGCAGTAAAAAGACTTGACTACAGGAATGGACTGAGCAAGAGGGAATTCCTCCAGCACATGCACTTGTTAGGAAGGTTGAAGCATGAAAATCTGGTAGAAATCATCTCTTTCTACTATTCTGAGGAGGAAAAGTTGGTGGTTTATGAGTTCATCTCTAATTGCTCTTTGTTTGAGCTCTTACACGAGAATAGAAGAGTTGGAAGAACTCCCCTTGATTGGTCAACAAGGCTGGCTGTAATCAAAGGCATAGCAAAGGGTCTAGATTTCCTTCACAATTCTTTGCCTTCTCACAAGGTCCCTCATGCCAACCTAAGAACATCCAACGTCCTCATTCATCAAGATGACAACGGTTTTCATTCCAAGCTAACAGACTTTGGCTTCTTGCATTTACTTTCTGCTAAAAAATCTGCAGAAAAGCTAGCCATAAGCAGGTTACCTGAATTTGTGCAAGGGAAGAAGCTCACACACAAAGCTGATGTCTATTGTTTTGGAATCATCATACTAGAGATTATAACTGGGAAAGTTCCTGGTGAAATCTTAGGTGAGGTTGGAGAAAGAACCAGTGATCTTTCTGAATGGGTAAGAACAGTGGTGAACAATGATTGGTCCACAGATATATTGGATGAAGAGATATTAGCAGCAAGAGAAGGGCATGGTGCTATGTTTGAGCTGACAGAGTTAGCTCTACAGTGTACAGATACGACACCAGAGAACCGGCCTAAAATGAATGAAGTTTTGATAAGAATAGAAGAGATAGAGCAAATGAAAACAGAGAATGACTGA 1818 0.4087 LAFFYRSCLCLGFLSFLLVNLVVPEYYPEEREALLLLINSLTSASNLHGNWTGPPCIANQSRWEGITCSNWHVVHIALEGIELLGSLPPTFLQNITFLTQVNLRNNLIYGNLPNLTNLMFLEHVLLSYNRFSGLIPIEYVGLPRLKELELQENHLDGQIPPFDQTSLINFNVSYNHLVGPIPQTSVLMKFPKSSFVNNSGLCGKPLDKPPAPFPAPPPAIIIPPSPAKEEQRKRLHVWAIALIAAAAVLIPLLVITAFLFCKTRAHGKETTRNESAGYGFRAWAENIMSHSVSTEDPERSSRMEIFTKELPVFDLDDLLRASAEMLGKGNLGTTYKATLETGAVVAVKRLDYRNGLSKREFLQHMHLLGRLKHENLVEIISFYYSEEEKLVVYEFISNCSLFELLHENRRVGRTPLDWSTRLAVIKGIAKGLDFLHNSLPSHKVPHANLRTSNVLIHQDDNGFHSKLTDFGFLHLLSAKKSAEKLAISRLPEFVQGKKLTHKADVYCFGIIILEIITGKVPGEILGEVGERTSDLSEWVRTVVNNDWSTDILDEEILAAREGHGAMFELTELALQCTDTTPENRPKMNEVLIRIEEIEQMKTEND 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2562 605 Gene3D Phosphorylase Kinase; domain 1 285 395 - -
Sto8g2562 605 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 20 599 - -
Sto8g2562 605 SUPERFAMILY L domain-like 26 191 - -
Sto8g2562 605 Pfam Protein tyrosine and serine/threonine kinase 324 591 IPR001245 GO:0004672|GO:0006468
Sto8g2562 605 Gene3D Transferase(Phosphotransferase) domain 1 396 605 - -
Sto8g2562 605 SUPERFAMILY Protein kinase-like (PK-like) 323 594 IPR011009 -
Sto8g2562 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 599 - -
Sto8g2562 605 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Sto8g2562 605 ProSiteProfiles Protein kinase domain profile. 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2562 605 Gene3D Ribonuclease Inhibitor 27 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2562 Sto-Chr8 17858098 17860550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2562 15 599 Receptor kinase-like Gene Family AT4G31250 33.028 1.06e-108 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto8g2562 PK_Tyr_Ser-Thr 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2562 - - gmx:100788386 798.119