Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2547 ATGCCATTTTTATCAGCTGATAGTTCGAAGAAGACTGATCCTAAGGCACAGGCCTTGAAAACTGCTAAAGCAGTCAAGTCAGGCCCTACCTTCAAGAAGAAGGCCAAGAAAATCCGCACATCCGTCACATTCCATCGGCCAAAGACTTTAAAAAAGGCCAGGAATCCCAAATATCCTCGTATTAGTGCTCCACCAAGAAATAAGCTTGAtcattatcaaattttgaaatacCCTCTCACCACTGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACCTACGTGCTGACAAGAAGAAGATAAAGGATGCGGTGAAGAAAATGTATGACATTCAAGCCAAGAAAGTAAATACCTTGATCAGGCCTGATGGCACCAAGAAAGCCTATGTCAGACTGACTCCTGATTATGATGCCTTGGATGTGGCAAACAAGATTGGGATTATCTAA 465 0.4065 MPFLSADSSKKTDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKARNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2547 154 Hamap 50S ribosomal protein L23 [rplW]. 74 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Sto8g2547 154 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 6 154 - -
Sto8g2547 154 Pfam Ribosomal protein L23 74 136 IPR013025 GO:0003735|GO:0005840|GO:0006412
Sto8g2547 154 Gene3D - 35 154 IPR012677 -
Sto8g2547 154 ProSitePatterns Ribosomal protein L23 signature. 132 147 IPR001014 -
Sto8g2547 154 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 71 147 IPR012678 GO:0003735|GO:0005840|GO:0006412
Sto8g2547 154 PANTHER 60S RIBOSOMAL PROTEIN L23A 6 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Sto8g2547 154 MobiDBLite consensus disorder prediction 1 38 - -
Sto8g2547 154 Pfam Ribosomal protein L23, N-terminal domain 15 64 IPR005633 -
Sto8g2547 154 TIGRFAM uL23_arch: ribosomal protein uL23 78 154 IPR019985 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2547 Sto-Chr8 17722765 17723735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2547 27 154 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 90.625 4.75e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2547 K02893 - jre:109021970 281.567