Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2532 ATGACAGGTGGTGCTGTTGATCACAGCAATCGTATGGATCTAAAGCCAACTGAAGCTTCTAATGCAAACTACACAGGTAAGAACAGTCATCTTACTGCTTTGAGATTATCTCAATTTGATATGCCTTCTTACAAAGTTCCTATTACAGAAGAGTATCCCTTATTCAGAGAAGCAAACCAGTCAGTATTGGATAGTCCAAGTCATGAAGTTGATCTTGGTGAGGATGATCTGGACATTTTATGGAGTGAGCTTATTTTGAAGGAGAAAATTGGAACAGGTTCATTTGGAACTGTCCTTCGTGCGGATTGGCGTGGTTCTGATGTTGCTGTGAAAATTCTTAAGGTGCAAGGTTTTGATGCAGAACGGTATGAAGAATTTAGAAAGGAGGTCTTACTCATGAAACGTCTACGGCATCCAAACATTGTTCTCTTAATGGGTGCAGTTTTTCAGCAACCCAACTTTTCCATAGTGACAGAATATTTATCAAGAGGAAGCTTGTTTGAACTTCTGCGCATGCCGGATGCTAGATCAGTTCTCAGTGCAAAGCGCCGGTTTAGTATGGCTTACGATGTGGCAAGTGGAATGAATTATCTGCATCAAATGAAACCTCCGATTGTTCATAGAGATCTGAAGTCTCCAAATCTTTTAGTGGATGATACATATACAGTTAAGGTGTGTGATTTTGGTCTCTCCCGCACCAAGGCAAACACATTTCTTTCATCTAAAACAGCTGCGGGGACTCCTGAGTGGATGGCACCAGAAGTCATTCGTGGCGAGCCATCAAATGAAAAATGTGATGTATTCAGTTTTGGGGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCTTGGAGAAATTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGCTTTATGGGCAAAAGGCTAGAAATTCCAAGCTATGTGCATCCTCAAGTGGCTGCCTTAATTGAGCTCTGCTGGGCCTCTGAACCCCAGAGACGCCCTTCTTTCTCCTATATTATGAACTGTTTGCAGCAAATGATTACTGATGTATAA 1038 0.4191 MTGGAVDHSNRMDLKPTEASNANYTGKNSHLTALRLSQFDMPSYKVPITEEYPLFREANQSVLDSPSHEVDLGEDDLDILWSELILKEKIGTGSFGTVLRADWRGSDVAVKILKVQGFDAERYEEFRKEVLLMKRLRHPNIVLLMGAVFQQPNFSIVTEYLSRGSLFELLRMPDARSVLSAKRRFSMAYDVASGMNYLHQMKPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDVFSFGVILWELVTLQQPWRNLNPSQVVAAVGFMGKRLEIPSYVHPQVAALIELCWASEPQRRPSFSYIMNCLQQMITDV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2532 345 SUPERFAMILY Protein kinase-like (PK-like) 73 338 IPR011009 -
Sto8g2532 345 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2532 345 CDD STKc_MAP3K-like 90 336 - -
Sto8g2532 345 MobiDBLite consensus disorder prediction 1 23 - -
Sto8g2532 345 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 344 - -
Sto8g2532 345 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2532 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Sto8g2532 345 ProSitePatterns Protein kinases ATP-binding region signature. 90 111 IPR017441 GO:0005524
Sto8g2532 345 Pfam Protein tyrosine and serine/threonine kinase 85 338 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 PRINTS Tyrosine kinase catalytic domain signature 158 171 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 PRINTS Tyrosine kinase catalytic domain signature 199 217 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 PRINTS Tyrosine kinase catalytic domain signature 246 256 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 PRINTS Tyrosine kinase catalytic domain signature 265 287 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 PRINTS Tyrosine kinase catalytic domain signature 309 331 IPR001245 GO:0004672|GO:0006468
Sto8g2532 345 Gene3D Transferase(Phosphotransferase) domain 1 163 345 - -
Sto8g2532 345 Gene3D Phosphorylase Kinase; domain 1 77 162 - -
Sto8g2532 345 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 55 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2532 Sto-Chr8 17590937 17595057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2532 59 342 MAP Kinase Kinase Kinase AT5G03730 70.775 2.72e-138 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sto8g2532 PK_Tyr_Ser-Thr 1.5e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2532 8 17590937 17595057 Sto13g3111 13 35483501 35495474 CCT
Sto8g2532 8 17590937 17595057 Sto8g2532 8 17590937 17595057 ECH