Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2529 ATGATATCTTCGGGGGTAAACTTGGTGATGACTGTGATTGGATTTGCGGTGAGCACTTTGTTCATCGTTTTCGTCTGCACTAGACTTGTCTGTGCTCGAATTCACTTGAATGCTTCCCGCCGATCCTTTCCTGTTGCTTACAGATCGGATCTCAACTTGCTGGAGCGTGGATTTCATGGTCTTGAACCCATGGCAGTAGCGAATTTTCCGACGAAGAAGTACAGCGATGAATGTTTTTCTTCTGCAGATGATTCTCAGTGCACTGTCTGTCTTTCGGAATACCAAGGTGAAGATGTACTGCGCATCCTCCCGTATTGTGGACACTTCTTCCATGTCATCTGCATAGACATATGGCTGCAGCAACATTCCACATGTCCTGTTTGTCGAATATCATTGCGCGAACTTTCCGAGAGAAAGCGCATAATGCAACCGCTATTCAGCTCTGCCGTTCGATCTAATTCTAGCACAGGATCCATTGACACTCATCCTTATCATTGTATGATGGCTAATAATGGATTATCATCAAGAGACCCTAACATACACGGGGCGAACCCTGTACAACAGGATCATTATGCATCACAGGATGGAGGAGCAGTTATTGCAGAGAGTGTCACCCATTTAAGTCATGATGGTCAGACCATGAAAGATGCAGGAAACAAGCTTGTTGTAGAGAGCCCATCAAATCCCATAAGTTAA 696 0.4497 MISSGVNLVMTVIGFAVSTLFIVFVCTRLVCARIHLNASRRSFPVAYRSDLNLLERGFHGLEPMAVANFPTKKYSDECFSSADDSQCTVCLSEYQGEDVLRILPYCGHFFHVICIDIWLQQHSTCPVCRISLRELSERKRIMQPLFSSAVRSNSSTGSIDTHPYHCMMANNGLSSRDPNIHGANPVQQDHYASQDGGAVIAESVTHLSHDGQTMKDAGNKLVVESPSNPIS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2529 231 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Sto8g2529 231 Pfam Ring finger domain 86 129 IPR001841 -
Sto8g2529 231 SUPERFAMILY RING/U-box 79 134 - -
Sto8g2529 231 CDD RING-H2_PA-TM-RING 86 129 - -
Sto8g2529 231 PANTHER OS11G0150450 PROTEIN 1 228 - -
Sto8g2529 231 MobiDBLite consensus disorder prediction 210 231 - -
Sto8g2529 231 PANTHER OS11G0150450 PROTEIN 1 228 - -
Sto8g2529 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 134 IPR013083 -
Sto8g2529 231 SMART ring_2 87 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2529 Sto-Chr8 17555862 17558320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2529 84 132 C3H Transcription Factor Family AT4G10150 61.224 2.12e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2529 - - gmx:100794979 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2529 8 17555862 17558320 Sto8g2529 8 17555862 17558320 ECH