Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2509 ATGGCTACAGAAGACTATTCTCTTCTGGACTCTCCTTCCCACCATTCTCACTCGCAGTCTCTCCTTCACCCTCAATCTCGCCACttcccttcctcttcctcctctagCCCTACCACCGGACTCCCCACCTCCGCTCATGCCGCCGATTCCGCCAACGCCGATTACTACGCACAAACTTTCCATGAcgacggcgacggcgacggTGAAGGTTCCTCTGATCCTAACAAATCCGGTGGCTCCGGAGTCCTGACCCCTAATTCGAAGCGTGCCGTCGTCGCGGACAGTGCTAATTACTATaacaagaaattgaaaacctcgGCCACCCGTTCCGGTGGCAGCGCTGCTACGGCTACGAGCGGTGAGCCCGATTCGGGAACCGAAGCGACGTACCGGATCGATTACCGGAAGGATCGCGAGGAATGGAGCGACACGGCGATCGCTTGTCTCCTGGACGCGTATACGGAGAAACTCAACCAGCTGAACCGCGGGAATCTGCGGGGGCGCGATTGGGAGGAGGTGGCGGAAGCCGTCAGCGAGCGGTGCGCCGTCGTCGTCGGCGGCGGCATTGATGGGAAGAACAAATCGTTCAAGAGTGTGGAGCAATGCAAgaacaaaattgataatttgaagaagAGATATAAGGTGGAGCTTCAGAGGATAAGTAATGGCAACGTCGCCACGAGTAACTGGCATTGGTTTAAGAAGATTGAAGGTATTGTTGGGAACTCATTGACTGTGAAGACGATGTCAGATGATGAGAAGGGTGTTGCAGCTAATTCCTTGTCTGTGACTAGACGCCCTAAGAACAGACATACAACCACCAATGTTGCAGTGGTGAACAATCAGAAACCAAAACCAGCGTCAAATCTTAAATGGCATAGAGTTGTGTTTAAAATAAGTGGTTCAGCATTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGACAACAGCTTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAAATTCATGGGTGTCTGCTACTGGGTTGGATAGACCTATGGCTTACCAAATTGGTATGATGGCAACGGTTATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAGCTGGGTATTCAGGCACGTGTTCAGAGTGCATTCTCTGTGCCAGAGGTTGCTGAACCTTATAGCAGGCAACGAGCTATCCGACATCTCGAGAAAGGAAGGGTGGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTCTTCACCACTGATACAGCTGCTGCTCTGAGAGCTTCCGAGCTTAATGCAGACGCTGTTCTGAAAGGTACCAATGTTAATGGTGTCTATGATTGCCATACCAGTAGTGACAATGTAACACTTGATCACATTTCCTTTAGGGAAATTGCTTCTAGGGGCGTCACCTCCATGGACATGATGGCACTAGCATATTGTGAAGAGAACGGAATTCCCGTTGTAGTATTCAACTTGCTTGAACCTGGGAATGTTTCAAGAGCACTATGTGGAGATCAAGTTGGCACGTTGATTGATCAAACAGGAAGTATTGGTTAA 1593 0.4733 MATEDYSLLDSPSHHSHSQSLLHPQSRHFPSSSSSSPTTGLPTSAHAADSANADYYAQTFHDDGDGDGEGSSDPNKSGGSGVLTPNSKRAVVADSANYYNKKLKTSATRSGGSAATATSGEPDSGTEATYRIDYRKDREEWSDTAIACLLDAYTEKLNQLNRGNLRGRDWEEVAEAVSERCAVVVGGGIDGKNKSFKSVEQCKNKIDNLKKRYKVELQRISNGNVATSNWHWFKKIEGIVGNSLTVKTMSDDEKGVAANSLSVTRRPKNRHTTTNVAVVNNQKPKPASNLKWHRVVFKISGSALAGNCQSIDPKVAMQIAREVTTACRLGVEVAIVVGGRNFFCGNSWVSATGLDRPMAYQIGMMATVMNSILLHSALEKLGIQARVQSAFSVPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAVLKGTNVNGVYDCHTSSDNVTLDHISFREIASRGVTSMDMMALAYCEENGIPVVVFNLLEPGNVSRALCGDQVGTLIDQTGSIG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2509 530 Gene3D - 141 215 - -
Sto8g2509 530 Pfam Myb/SANT-like DNA-binding domain 138 237 IPR044822 -
Sto8g2509 530 PANTHER KINASE, PUTATIVE-RELATED 1 529 - -
Sto8g2509 530 Pfam Amino acid kinase family 294 503 IPR001048 -
Sto8g2509 530 Gene3D - 282 529 IPR036393 -
Sto8g2509 530 MobiDBLite consensus disorder prediction 105 127 - -
Sto8g2509 530 MobiDBLite consensus disorder prediction 12 46 - -
Sto8g2509 530 Coils Coil 199 219 - -
Sto8g2509 530 CDD AAK_UMPK-PyrH-Ec 294 524 IPR015963 GO:0005737|GO:0006221|GO:0033862
Sto8g2509 530 MobiDBLite consensus disorder prediction 1 88 - -
Sto8g2509 530 MobiDBLite consensus disorder prediction 105 125 - -
Sto8g2509 530 PANTHER URIDYLATE KINASE 1 529 - -
Sto8g2509 530 Hamap Uridylate kinase [pyrH]. 290 524 IPR015963 GO:0005737|GO:0006221|GO:0033862
Sto8g2509 530 SUPERFAMILY Carbamate kinase-like 291 523 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2509 Sto-Chr8 17377316 17380562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2509 141 248 Trihelix Transcription Factor Family AT3G14180 40.741 1.24e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto8g2509 AA_kinase 4.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2509 - - gmx:100791426 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2509 8 17377316 17380562 Sto8g2509 8 17377316 17380562 ECH