Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2503 ATGGCGCTTGAGTCGTGTGAAGGTGGAGAGCTGTTTGATCAAATAACCCGGAAAGGTCGTCTGTCAGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATATATACATAGTTTGGGATTGATACATCGTGATATTAAGCCAGAGAACTTGTTACTTACGTCTGAAGGACATATTAAAGTAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGACAGCCGGATCACGGTCCTTCCTAATGCTGCCGCATCAGATGATAAAGCCTGCACGTTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCTCTTGGATGCACATTATATCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATAGCCAGAGATATTCGATTTCCAGATTACTTTTCTGAGGAAGCTAGGGACGTTATTGACCAGTTATTGGATTCAAATCCTATAAGAAGACCAGGTGCAGGACCTGATGGTTATGCTGCTCTTAAATTGCATCCGTTTTTCAAGGGAGTAGACTGGAAAAATATAAGGCAAGAAACCCCCCCAAAGCTTGCTCTAGAAGCAGGGGGTCATTCTCCTGATCATCAAGATTCGTCATGGAATCCTCAGGACGGTTCTGCTAATGGAAATCCTGGTGCTACATCTTCTGACGGGACTGCTCACATAACCAGGATAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGAACCTGGTGAATCTGTTATTATGATCTCAATGGTGAAGAAAATACAGAAACTGACAAGCAAGAAGGTGCAGCTCATTCTTACCAACAAGCCAAAGTTGATCTATGTCGACCCATCGAAACTAATCGTAAAGGGAAATATGATATGGTCCGATAATCCAAATGATCTTACTGTCCAAGTGACTAGTCCTTCAAATTTTAAGATTTGCACACCAAAAAAGGTTCTGTTATTTGAAGATGCAAAGCAAAGAGCACATCATTGGAAAAAGGCGATCGAAGCGCTTCAAAACCGGTGA 1089 0.4215 MALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTSEGHIKVADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSEEARDVIDQLLDSNPIRRPGAGPDGYAALKLHPFFKGVDWKNIRQETPPKLALEAGGHSPDHQDSSWNPQDGSANGNPGATSSDGTAHITRIASIDSFDSKWQQFLEPGESVIMISMVKKIQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMIWSDNPNDLTVQVTSPSNFKICTPKKVLLFEDAKQRAHHWKKAIEALQNR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2503 362 Gene3D - 240 362 IPR011993 -
Sto8g2503 362 SUPERFAMILY Protein kinase-like (PK-like) 1 233 IPR011009 -
Sto8g2503 362 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 358 - -
Sto8g2503 362 Pfam Protein kinase domain 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2503 362 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 1 358 - -
Sto8g2503 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Sto8g2503 362 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2503 362 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2503 362 Pfam PH domain 259 361 IPR033931 -
Sto8g2503 362 Coils Coil 342 362 - -
Sto8g2503 362 MobiDBLite consensus disorder prediction 210 244 - -
Sto8g2503 362 SUPERFAMILY PH domain-like 188 361 - -
Sto8g2503 362 MobiDBLite consensus disorder prediction 220 244 - -
Sto8g2503 362 Gene3D Transferase(Phosphotransferase) domain 1 10 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2503 Sto-Chr8 17308693 17313440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2503 1 362 AGC Kinase Gene Family AT3G10540 80.163 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Sto8g2503 Pkinase 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2503 K06276 - mnt:21388684 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2503 8 17308693 17313440 Sto8g2503 8 17308693 17313440 ECH