Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2489 ATGAACTGTCTTCAGAATCTTCCTTTATCCTCGGGTTTGCCTTTCCAAAGCATTAGATGCCATCTGCGGAAGCCTCTTTGCTTCGCCAATACGCtgGGAATGGCCAATACTTGTGATCCAAATCGGAGTATGGCAGTGAAGTCTGCTTCTGGTTCTATGTCCAGTGCAGAGACAAATAGTTCTGGTGTGAAGGAGGAAAAGTCTGAGACATATAGTCATGACATGACACAAGCCATGGGTGCTGTATTGACTTATAGGCACGAATTGGGGATGAACTACAACTTCATCCGTCCAGACTTAATTGTGGGATCATGCCTACAGACTCCTGAAGATGTTGACAAGCTTCGTGCTATAGGAGTGAAAACTATATTTTGCTTACAACAAGATCCAGACCTGGAATATTTTGGAGTTGATATCAATGCCATACGAGAATATGCGAGGTCTTGCAATGATATTCAACACTTGCGTGCTCAGATAAGGGACTTTGATGCATTTGATTTACGGATGAGGCTTCCAGCTGTAGTTAGCAAATTGTACAAGGCAATAAATCGCAATGGTGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGTTGGCATATatgttttgggttcagggttatAAACTTGATGAGGCTCATAGATTGCTCCTGAGCAAAAGGTCATGCTTCCCAAAATTGGATGCTATAAAAGGTGCAACAGCTGATATTCTTACAGGCCTCAGTAAAAAGCTTATCACGTTGACATGGGAAGACAACAATTGCTCTTCAGTTGAAATTTCCGGACTTGATATTGGATGGGGTCAGAGAATGCCCCTGCATTTTGATGAGAAACAAGGTTTCTGGGTTCTCCAAAGGGAATTGCCTGAAGGAAGTTATGAGTACAAGTACATCGTTGATGGGGAATGGACATGCAGTAAGTACCAGCTTGTGACCTCTCCCAACAAAGACGGCCATGTCAATAATCTTCTGCAAGTCCTTGACAATTCAAGCAGTGTTAATGCCTCCATCAGGAAGAGGTTGATTGGTGATGATCCTGATCTCACAAAGGATGAACGGCTGAAAATAAGACAGTTTCTTGAGTCTTGTCCTGATGAAGAAGATTGA 1125 0.4222 MNCLQNLPLSSGLPFQSIRCHLRKPLCFANTLGMANTCDPNRSMAVKSASGSMSSAETNSSGVKEEKSETYSHDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRAIGVKTIFCLQQDPDLEYFGVDINAIREYARSCNDIQHLRAQIRDFDAFDLRMRLPAVVSKLYKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLDEAHRLLLSKRSCFPKLDAIKGATADILTGLSKKLITLTWEDNNCSSVEISGLDIGWGQRMPLHFDEKQGFWVLQRELPEGSYEYKYIVDGEWTCSKYQLVTSPNKDGHVNNLLQVLDNSSSVNASIRKRLIGDDPDLTKDERLKIRQFLESCPDEED 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2489 374 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 233 IPR029021 -
Sto8g2489 374 SMART dsp_5 92 236 IPR020422 GO:0006470|GO:0008138
Sto8g2489 374 Gene3D Protein tyrosine phosphatase superfamily 85 365 IPR029021 -
Sto8g2489 374 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470|GO:0008138
Sto8g2489 374 Gene3D Immunoglobulins 247 337 IPR013783 -
Sto8g2489 374 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 227 IPR000387 GO:0016311|GO:0016791
Sto8g2489 374 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 373 IPR030079 GO:0005982|GO:0007623|GO:0019203
Sto8g2489 374 Pfam Dual specificity phosphatase, catalytic domain 135 230 IPR000340 GO:0008138|GO:0016311
Sto8g2489 374 Pfam Glycogen recognition site of AMP-activated protein kinase 253 335 IPR032640 -
Sto8g2489 374 SUPERFAMILY E set domains 251 333 IPR014756 -
Sto8g2489 374 CDD E_set_AMPKbeta_like_N 252 332 - -
Sto8g2489 374 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 373 - -
Sto8g2489 374 MobiDBLite consensus disorder prediction 49 70 - -
Sto8g2489 374 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203|GO:0046838
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2489 Sto-Chr8 17220021 17229709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2489 91 373 Protein tyrosine phosphatase (PTP) family AT3G52180 71.025 2.81e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2489 - - zju:107413253 613.994