Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2435 TTGTGCACAGTAGCAGAAGTGAAGTCTTACTTCAGAAGTATCAGTGAAAAAAATAGATCAACAAGTGCCAATTACCTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGTGAGCCGGGATGGGCCTGTAGTGTTGGTCCAAACCAGCAGGTTGACCTTCAAAATTCGAAGGAGATACCTGCAAGAACCACAAAATGTCAAGCATGTTGTGAGGGCTTCTTCTGTCCTCATGGTATCACATGCATGATACCTTGCCCACTAGGTTCCTATTGCCCTCTTGCAAGACTTAATGAAACAACTGGTGTATGTGAACCATATCTTTACCAATTGCCTCCAAGTCAACCAAACCATACATGTGGAGGTGCAAATATTTGGGCTGATTTTAGTAGCAGTATTGAGATATTTTGTTCAGCAGGATCATATTGTCCAACAACCACTAAAAGAATCCCTTGCAGTAATGGGTATTATTTGTCTCAAAACAAGATTCTGGAAGAAGGATGCTTCAAGTTGAGTTCATGTAATTCAAACACTGCAACCCAAAATATGCATGCATATGGAATTATGCTCATCGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTTCTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAGTGGCTGAATCCAGAGAGGCAGCAGCCAGAAGTGCAAGGAACACTGCAAATGCACGCCAAAGATGGAAATCTGCAAAAGATGCTGCGAAGAAGGGAGCAAGTGGGTTGCAAGCTCAACTATCACGCACATTTTCTCATCAGAAAACTTCTGAAACAGATGTTGAACTGTTGCCACCACATTCTACTACTTCAAGCATGGCTGTAACTTCATCTGCAGCGCcaaaggaaaagggaaaagaaCCTAGTGACCTGATGAAGATGATGCACAAGATAGAAAATGATCCAGATATTGATGATAACTTCAATGtagaaaatagagaaaaaagtGTTACACGTAAAATGCCCAAGGGAAAACAAAAGAATACTCATACCCAGATTTTTAAGTATGCATATTCTCAACTTGAAAAGGAGAGGGCTCAACAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTTATTAGAATGGCTACTAATACTGAACAGAGAAAAAGGCCTTTAATTGAGATTTCTTTCAAAGATCTGACTCTCACTCTGAAAGCACAAAACAAGCATATATTGAGATGTGTTACAGGTAAAATTAAACCTGGCCGCATTACTGCTGTCATGGGTCCATCTGGTGCAGGCAAGACAACATTTCTTTCAGCTTTAGCTGGAAAATCATTTGGATGCACAGTCACTGGTTCAATTCTTATAAATGGAAAGAATGAAGTAATCCACTCCTACAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACAGTGGAAGAGAACCTCTGGTTCAGTGCACAGTGCAGGCTATCAGATGACTTGTCAAAACCAGATAAAGTTCTAGTTGTTGAAAGGGTTATTGAATTCTTGGGGCTTCATTCAGTGCGAAATTCCTTGGTTGGGACTGTGGAAAAGCGAGGAATCTCTGGAGGCCAGAGGAAGCGAGTAAATGTTGGATTGGAGATGGTCATGGAACCTTCCCTGTTGATCTTGGATGAACCCACATCTGGTTTGGACAGCGCATCATCTCAGCTCCTTCTTAGAGCACTTCGACGTGAAGCTCTTGAGGGTGTAAACATTTGCATGGTGGTACACCAACCTAGCTACGCCTTGTTCAAGATGTTCGATGACTTGATACTTCTGGCAAAAGGTGGTCTTACTGTCTATCATGGATCAGTCAAGAAAGTTGAAGAATACTTTGCAGGTCTTGGGATCAATATCCCGGAACGGATCAACCCTCCAGACTACTTCATTGACATTTTGGAGGGTATAGCAGAACCTGGTCGAAGCTCTGGAGTGAGCTACAAAGAGTTGCCAATGAGATGGATGCTTTATAATGGCTACTCAGTACCTCTTGATATGCGgcagaaaatggaaaattttgaTGTCTCCTCCAAAGGTGTGAACTCAGCTAATGAAACAGATCCCGATGGTTCTGGTCATAAGAACAAATCCTTTGTTGGAGAATTATGGCAAGATGTAAAGCACAATGTGGAAATGAGGGGGGATAAGATTCGACTCAATTTTTCTAGGTCCAAGGATTTATCTAACCGGAAGACTCCTGGTGTGTTTAAGCAATATAAGTACTTCCTAATAAGGGTTGGTAAGCAGAGATTGAGGGAAGCTAGGGTTCAAGCCATAGATTACCTGATTTTATTACTTGCTGGAGCATGCCTAGGATCGCTTACTAAAACGAGTGAACAAACGTTTGGTGCAGCTGGGTACACCTACACAGTGATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTAAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCCGGCATGAGCAGCTTGGCTTATTTTCTCTCCAAAGACACaattgatcattttaatacagtGATCAAGCCTCTAGTATACCTCTCCATGTTCTATTTCCTCACCAATCCAAGATCTACTTTTGCAGATAATTACATTGTGCTTCTCTGTCTAGTGTACTGTGTGACTGGTATAGCATATGCATTGGCCATGTACTTTGAACCTGGTGCAGCCCAGCTATGGTCAGTACTTCTTCCAGTAGTTTTGACACTCGTTGCAACACAACAGAAAGATAGTGAATTTTTGAAGGTTATAGCTAAATTATGCTATTCTAAGTGGGCTTTGCAAGCATTTGTAACCGCAAATGCCGAAAgGTATCATGGAGTGTGGCTCATCACTCGTTGTGGATCACTTTTGAAGAGTGGCTATAAtcttcatgattggaatttgtgTGTGTTAATCCTCATTTTAATAGGCGTCATTAGTCGAGTCATAGCATTTTTCTGCATGGTCACTTTCCGGAAGAAGTGA 2988 0.4036 LCTVAEVKSYFRSISEKNRSTSANYLKPNKNCNLTSWVSGCEPGWACSVGPNQQVDLQNSKEIPARTTKCQACCEGFFCPHGITCMIPCPLGSYCPLARLNETTGVCEPYLYQLPPSQPNHTCGGANIWADFSSSIEIFCSAGSYCPTTTKRIPCSNGYYLSQNKILEEGCFKLSSCNSNTATQNMHAYGIMLIAALSTLLLIIYNFSDQVLTTRERRVAESREAAARSARNTANARQRWKSAKDAAKKGASGLQAQLSRTFSHQKTSETDVELLPPHSTTSSMAVTSSAAPKEKGKEPSDLMKMMHKIENDPDIDDNFNVENREKSVTRKMPKGKQKNTHTQIFKYAYSQLEKERAQQQENKNLTFSGVIRMATNTEQRKRPLIEISFKDLTLTLKAQNKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKSFGCTVTGSILINGKNEVIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSDDLSKPDKVLVVERVIEFLGLHSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFAGLGINIPERINPPDYFIDILEGIAEPGRSSGVSYKELPMRWMLYNGYSVPLDMRQKMENFDVSSKGVNSANETDPDGSGHKNKSFVGELWQDVKHNVEMRGDKIRLNFSRSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARVQAIDYLILLLAGACLGSLTKTSEQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFLTNPRSTFADNYIVLLCLVYCVTGIAYALAMYFEPGAAQLWSVLLPVVLTLVATQQKDSEFLKVIAKLCYSKWALQAFVTANAERYHGVWLITRCGSLLKSGYNLHDWNLCVLILILIGVISRVIAFFCMVTFRKK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2435 995 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 629 IPR003439 GO:0005524
Sto8g2435 995 MobiDBLite consensus disorder prediction 223 299 - -
Sto8g2435 995 ProSitePatterns ABC transporters family signature. 528 542 IPR017871 GO:0005524
Sto8g2435 995 MobiDBLite consensus disorder prediction 254 289 - -
Sto8g2435 995 Pfam ABC-2 type transporter 585 995 IPR043926 GO:0140359
Sto8g2435 995 Gene3D - 385 621 IPR027417 -
Sto8g2435 995 Pfam ABC transporter 406 556 IPR003439 GO:0005524
Sto8g2435 995 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 992 - -
Sto8g2435 995 SMART AAA_5 413 605 IPR003593 -
Sto8g2435 995 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 3 992 - -
Sto8g2435 995 CDD ABCG_EPDR 385 611 - -
Sto8g2435 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 620 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2435 Sto-Chr8 16668385 16687267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2435 382 588 Calmodulin-binding Proteins AT2G36910 28.774 2.79e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2435 8 16668385 16687267 Sto10g1121 10 10836243 10847162 ECH
Sto8g0914 8 5756268 5761981 Sto8g2435 8 16668385 16687267 ECH
Sto13g3212 13 36113932 36120513 Sto8g2435 8 16668385 16687267 ECH
Sto8g2435 8 16668385 16687267 Sto8g2435 8 16668385 16687267 ECH