Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2429 ATGGATACCATGCAAAATATCCAGACTGATGAAAGTAAGGAAGCTTCTGCCCAAGTTCATACAGACACATCTTTACAGTCATCAAAGTCAACAACAACTTTGTCAACAATTTCATCAAATGAAGCTTCACATTCTATTAAGCAGAAGAGTTCAGATGGCAGCAATGAGATGGAAGGTACTGCTGGTTGGAAGCTTTCAAATAGTCCTTGGAACTTACAAGTTATTGCACGTTCATCTGGCTCGCTAACGCGATTCATGCCGGATGATATTCCCGGTGTCACTTCCCCCATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAACTTCACAGCATGAATTTTCTTCACACTGGTTCACCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTATGCGTTTGAGGAAGTCATTCGCTCTGAGGCTTATGGTGGTAATATTGATCACTTAGGTATGTGA 480 0.4188 MDTMQNIQTDESKEASAQVHTDTSLQSSKSTTTLSTISSNEASHSIKQKSSDGSNEMEGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHTGSPKTWYAVPGDYAYAFEEVIRSEAYGGNIDHLGM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2429 159 Pfam JmjC domain, hydroxylase 97 150 IPR003347 -
Sto8g2429 159 Gene3D Cupin 3 157 - -
Sto8g2429 159 PANTHER LYSINE-SPECIFIC DEMETHYLASE 43 157 - -
Sto8g2429 159 ProSiteProfiles JmjC domain profile. 64 159 IPR003347 -
Sto8g2429 159 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 43 157 - -
Sto8g2429 159 SUPERFAMILY Clavaminate synthase-like 65 151 - -
Sto8g2429 159 SMART cupin_9 64 159 IPR003347 -
Sto8g2429 159 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2429 Sto-Chr8 16617497 16617976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2429 47 158 C2H2 Transcription Factor Family AT5G04240 83.036 8.27e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto8g2429 JmjC 8.1e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2429 - - gmx:100799861 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2429 8 16617497 16617976 Sto8g2429 8 16617497 16617976 ECH