Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2414 ATGGCTAAGGACATGGAGATGGCAGAGCGAGGGTCGTACTCCGCCAAAGACTATCACGACCCGCCTCCGGCGCCGCTCATTGACGCCGAGGAGCTCACCAAGTGGTCCTTCTACAGAGCCCTCATCGCAGAGTTCATAGCCACTCTGCTCTTCCTTTACATCACCGTCCTCACCGTGATCGGCTACAAGAGCCAGTCCGAGGGCGATGCTTGCGGCGGCGTCGGCATCCTCGGCATTGCCTGGGCCTTCGGTGGCATGATATTCATCCTCGTTTACTGCACCGCTGGAATTTCAGGGGGTCACATTAACCCAGCGGTGACATTTGGGTTGTTTTTGGCTCGCAAGGTGTCGCTGATCAGAGCGATCATGTATATGGTGGCTCAGAGCTTGGGGGCTATTTGTGGAGTTGGGTTGGTGAAGGCGTTCCAGAGTGCATACTACAAGAAGCATGGTGGTGGGGCCAATGAGCTCAGTGATGGCTACTCCACTGGCGTTGGCTTAGGCGCTGAGATCATAGGGACCTTTGTTTTGGTCTACACTGTGTTCTCTGCTACTGATCCCAAGAGGAGCGCTAGAGATTCTCATGTGCCgGTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATTCCGGTCACCGGCACCGGCATCAACCCGGCAAGGAGTCTAGGAGCTGCTGTTATCTACAACCAACAGAAAGCCTGGGATGACCATTGGATTTTCTGGGTAGGACCTTTCATTGGGGCAGCCATTGCAGCCTTCTACCACCAGTTCATCTTAAGGGCAGGTGCAGCCAAGGCTCTTGGATCATTCAGAAGCAATCCCTCTGTTTGA 852 0.5423 MAKDMEMAERGSYSAKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQSEGDACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQSLGAICGVGLVKAFQSAYYKKHGGGANELSDGYSTGVGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQQKAWDDHWIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPSV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2414 283 PANTHER PLASMAMEMBRANE INTRINSIC PROTEIN 25 1 280 - -
Sto8g2414 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Sto8g2414 283 SUPERFAMILY Aquaporin-like 31 267 IPR023271 -
Sto8g2414 283 CDD MIP 39 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Sto8g2414 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 280 IPR034294 -
Sto8g2414 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 TIGRFAM MIP: MIP family channel proteins 43 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g2414 283 Pfam Major intrinsic protein 31 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2414 Sto-Chr8 16443050 16445448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2414 1 283 Major Intrinsic Protein MIP AT3G53420 81.533 6.75e-174 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2414 K09872 - rcu:8279058 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2414 8 16443050 16445448 Sto10g1061 10 10221960 10227731 ECH
Sto8g2414 8 16443050 16445448 Sto8g2414 8 16443050 16445448 ECH