Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2402 ATGGCTTCCAACACATTGATGAGTTGTGGCATCTCCACTGCCTCCGCCTTCCCTTCCGTCCTCTCTTCCTCTAAGTCCAAATTCGCCGCCGCACTCCCGCTCCCCGGCGGTGCCTCCGCCGTGTCGGCTCGGTTCTCCATGACGTCCGACTGGATGCCCGGCCAGCCACGTCCACCTTACCTCGATGGTTCCGCACCCGGTGACTTTGGATTCGACCCTCTTCGTCTAGGGGAAGTCCCTGAGAATCTTGAGAGATATAAGGAGTCTGAACTCATTCATTGCAGATGGGCTATGCTTGCTGTGCCAGGGATATTGGTGCCAGAGGCATTGGGGTTAGGGAACTGGGTACAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGGCAAGCGACCTACCTGGGGAACCCAGTTCCGTGGGGTACCCTACCCACCATATTGGTCATTGAATTCCTAGCCATTGCCTTTTTCCAAGAATACAAAGTCAAAGAGATCAAAAACGGGCGTTTGGCGTTGTTGGCATTTGTGGGAATATGTGTGCAACAATCAGCATACCCGGGTACAGGACCTTTGGAGAACTTGGCCACTCATTTGGCCGATCCATGGCACAACAACATTGGAGACATCATCATCCCAAGAACAATTTCCCCTTGA 648 0.537 MASNTLMSCGISTASAFPSVLSSSKSKFAAALPLPGGASAVSARFSMTSDWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFFQEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2402 215 Pfam Chlorophyll A-B binding protein 155 180 IPR022796 -
Sto8g2402 215 Pfam Chlorophyll A-B binding protein 58 155 IPR022796 -
Sto8g2402 215 Gene3D Chlorophyll a/b binding protein domain 52 156 - -
Sto8g2402 215 Gene3D Chlorophyll a/b binding protein domain 157 212 - -
Sto8g2402 215 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 155 206 - -
Sto8g2402 215 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 23 155 - -
Sto8g2402 215 SUPERFAMILY Chlorophyll a-b binding protein 42 209 - -
Sto8g2402 215 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 155 IPR001344 GO:0009765|GO:0016020
Sto8g2402 215 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 155 206 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2402 Sto-Chr8 16324011 16325795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2402 1 167 Chloroplast and Mitochondria Gene Families AT3G54890 66.000 1.92e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2402 K08907 - pvy:116130060 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2402 8 16324011 16325795 Sto8g2402 8 16324011 16325795 ECH