Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2395 ATGGGTTATTCTCAATTCTATGTTGTTCTTCTGCTTTTATTATCAGTTTCTGTTGAAATTTGTTTAGCATCCTCCCCTGTGGAAGATCAAAAGAGGGATAAGATAACCTATTTGCCCGGACAGCCAAAAGATGTAGATTTTGCTCAGTACTCTGGGTATGTGACTGTGAACGAGCAAGCTGGGAGGGCATTATTTTACTGGTTGATTGAGTCACCCACGAGTCTTGGACCTAGGTCGAGGCCACTTGTTTTGTGGCTTAATGGTGGTCCTGGATGCTCCTCCGTTGCTTATGGTGCAGCTGAAGAGATTGGTCCTTTTCACATTAACCCTGATGGGAAGTCACTTTACTTGAATCCATATGCTTGGAACAATTTGGCTAATATACTATTCCTTGAGTCTCCTGCTGGTGTTGGTTTTTCATATTCCAATGAAACATCAGATCTGTACACATTCGGTGACCAAAAAACagCTGAAGATTCTTATGCATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAACATAGAGATTTCTACATCGCCGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAattatttaccaaaaaaataaggGAATGCAGAATCCAGCTATAAATTTTAAGGGATTCATGGTTGGAAATGCTGTTACTGATGATTACCATGATCTTGTTGGCACATTTGAGTACTGGTGGACACATGGTCTGATTTCAGATTCCACATATAAGATGCTACAATTTACCTGTGACTTTGTTTCCTCCCAGCATCCATCAGTACAATGCAATCAGAGTCTAAACATTGCAGTTTTGGAGCAGGGAAACATTGACCCTTATAGCATCTATACAAGACCGTGCAGTGATGCTGCATCACTCAAGCGTAGCCTGAACGGTCGCTATCCATGGATGTCTCGAGCTTATGATCCTTGTACTGAGAGGTATTCAGAGCTGTATTTCAATCTTCCTGAAGTTCAGGAGGCACTACATGCCAACGTAACTAATATTTCTTATTCATGGAAAACATGCAGTGATATTGTTGGGAACTACTGGGGGGATTCTCCACTATCTATGCTTCCCATATATCAAGAACTCATAAATGCTGGTCTCAAGATATGGGTATACAGTGGAGACACAGATTCTGTGGTTCCAATAACTGCGACTCGATATTCTATCGATGCTTTGAATCTTCCTACCATCACCAATTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGCCAAGTTTACAAAGGGCTCACATTGGTTACAGTTACAGGAGCCGGACACGAGGTTCCGCTTCACCGGCCTCGGCAAGCATTCATTCTTTTCCGATCATTCTTGGAGAACAAGCCAATGCCAACATAG 1380 0.4159 MGYSQFYVVLLLLLSVSVEICLASSPVEDQKRDKITYLPGQPKDVDFAQYSGYVTVNEQAGRALFYWLIESPTSLGPRSRPLVLWLNGGPGCSSVAYGAAEEIGPFHINPDGKSLYLNPYAWNNLANILFLESPAGVGFSYSNETSDLYTFGDQKTAEDSYAFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLAQIIYQKNKGMQNPAINFKGFMVGNAVTDDYHDLVGTFEYWWTHGLISDSTYKMLQFTCDFVSSQHPSVQCNQSLNIAVLEQGNIDPYSIYTRPCSDAASLKRSLNGRYPWMSRAYDPCTERYSELYFNLPEVQEALHANVTNISYSWKTCSDIVGNYWGDSPLSMLPIYQELINAGLKIWVYSGDTDSVVPITATRYSIDALNLPTITNWYPWYDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQAFILFRSFLENKPMPT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2395 459 Pfam Serine carboxypeptidase 39 454 IPR001563 GO:0004185|GO:0006508
Sto8g2395 459 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Sto8g2395 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Sto8g2395 459 Gene3D - 313 349 - -
Sto8g2395 459 PANTHER CARBOXYPEPTIDASE 9 458 - -
Sto8g2395 459 SUPERFAMILY alpha/beta-Hydrolases 31 458 IPR029058 -
Sto8g2395 459 Gene3D - 360 453 - -
Sto8g2395 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Sto8g2395 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Sto8g2395 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Sto8g2395 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Sto8g2395 459 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Sto8g2395 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2395 Sto-Chr8 16263569 16267482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2395 318 457 Calmodulin-binding Proteins AT2G22960 29.787 1.05e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2395 K16297 - gmx:100812000 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2395 8 16263569 16267482 Sto8g2395 8 16263569 16267482 ECH