Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2385 ATGGGTAAAGAGAAGGTTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAGTCAACCACCACTGGCCATCTCATCTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAAGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGAACCCAAATTCTTGAAGAACGGTGATGCAGGTATGGTTAAGATGATTCCCACCAAGCCTATGGTGGTGGAAACTTTCTCTGAGTATCCTCCACTTGGTCGTTTTGCTGTGCGTGACATGCGTCAAACTGTGGCTGTGGGAGTCATCAAGAGTGTGGAGAAGAAGGATGCTAGTGGAGCCAAGATCACCAAGGCTGCACAGAAGAAGGGCAAGTGA 390 0.4769 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDASGAKITKAAQKKGK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2385 129 Pfam Elongation factor Tu GTP binding domain 6 43 IPR000795 GO:0003924|GO:0005525
Sto8g2385 129 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42 110 IPR009001 -
Sto8g2385 129 Pfam Elongation factor Tu C-terminal domain 51 110 IPR004160 -
Sto8g2385 129 PANTHER ELONGATION FACTOR 1-ALPHA 1 60 127 - -
Sto8g2385 129 PANTHER ELONGATION FACTOR 1-ALPHA 1 1 58 - -
Sto8g2385 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 53 IPR027417 -
Sto8g2385 129 Gene3D Translation factors 33 111 - -
Sto8g2385 129 PANTHER TRANSLATION FACTOR 1 58 - -
Sto8g2385 129 PANTHER TRANSLATION FACTOR 60 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2385 Sto-Chr8 16176768 16178200 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2385 1 58 Eukaryotic Initiation Factors Gene Family AT1G07930 98.276 2.21e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2385 K03231 - vra:106770620 253.062