Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2374 ATGGAATTCCAACTCAATCCTTCCTCATCCAACATTTCAATCCCTttccctccttcttcttcttctccctctccttctccctCCCAATCCCAATCTCCCTCTCAGTCCCCGCCGTctcctccgccgccgccgcccGTCGTCGTGGTGGTCTCGCCTTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGTGTGCTGGCGCCTTATTTCCCGCCCACCGATCCTCTCAAGTTCACCATTGCACACAGAGTCTTCGGAGCCAGCAATATTATCAAGTTCTTGCAGGAACTTCCGGAGTCACAAAGAGCAGATGCAGTGAGCAGTATGGTGTATGAAGCCAATGCAAGAATAAGAGACCCAGTCTATGGCTGTGCAGGAGCCATATGCCAGCTTCAGAAGCAAGTCAGTGAGCTGCAAGCTCAGCTAGCCAAAGCCCAAGCCGAGCTAGTTAACATGCACTGCCAACAAGCCAATTTGGTCGCTCTAATATGTATGGAGATGAGCCAGTCTCAAGACTCGTCGGCTGCGGCGACCGCGGCCGTGGCCCAGCCGGCTCAGCCGCCTCAACACCTTGATATGAGCTGCTTCTTTGATGACAACAGCTTCGGCTCCGCTTCAGCTTGGGAACCACTTTGGAcatga 651 0.4931 MEFQLNPSSSNISIPFPPSSSSPSPSPSQSQSPSQSPPSPPPPPPVVVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQANLVALICMEMSQSQDSSAAATAAVAQPAQPPQHLDMSCFFDDNSFGSASAWEPLWT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2374 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 33 213 - -
Sto8g2374 216 Coils Coil 131 158 - -
Sto8g2374 216 ProSiteProfiles LOB domain profile. 51 152 IPR004883 -
Sto8g2374 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 33 213 - -
Sto8g2374 216 Pfam Lateral organ boundaries (LOB) domain 52 149 IPR004883 -
Sto8g2374 216 MobiDBLite consensus disorder prediction 1 43 - -
Sto8g2374 216 MobiDBLite consensus disorder prediction 1 17 - -
Sto8g2374 216 MobiDBLite consensus disorder prediction 18 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2374 Sto-Chr8 16089115 16090923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2374 48 216 AS2 family AT1G07900 66.860 2.23e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g2374 LOB 2.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2374 8 16089115 16090923 Sto8g2374 8 16089115 16090923 ECH