Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2360 ATGGGGACTACGAATCTTCTcgtgtttttcttttctctgaTGGCTGCTTGCTATATGTCGGCGGCCAAAGTGGTGCTGATTGGGACCAACGTCACTCTCTCCTTTGACGATATTGAAGCTAATTTCGCTCCTACAGTGAAAGGTTCTGGAGAATGTGGGGTTTTGTATATGGCAGAGCCGCGCGATGCTTGTACAGCACTGACAAATAAAGCTGAGCAGCTTTCAAATGCAAGTAACCCTTTTGTTCTAACAATTAGAGGGGGATGTAGCTTTGAAGAAAAGGTCAGACGAGCACAACAAGCTGGTTTCAGAGCTGTAATTGTCTATGACAATGAAGATGACGGTGTCTTAGTTGCAATGGCAGGAAATTCAGCTGGTATAAAAATACATGCAGTATTTGTATCTAAAATTTCTGGTGAAGTACTAAAAAGATACGCTGGACAGACTAACATTGAAGTGTGGCTAATCCCAAGTTTTGAAAACTCAGCATGGTCTATCATGGCAATTTCGTTCATTTCCCTACTAGCAATGTCAGCAGTTCTGGCCACATGTTTCTTCGTCCGTAGGCATCGTATCCGAAGAGAAAGGCCTCAAGCTTCTCGTGTCCGTGAATTTCATGGGATGAGTAGTCGCCTAGTGAAAGCAATGCCTAGTTTGATATTTACTGCTGTTTTAGAGGATAACTGTACGTCAATAACATGTGCAATATGCCTTGAAGACTATTGTGTTGGAGAAAAGCTCAGGATTCTACCCTGTTGTCACAAGTTTCATGCTGCCTGTGTGGATTCTTGGCTTACTTCGTGGAGAACATTTTGTCCAGTTTGTAAGCGCGATGCTAGAACTGGTCTACCTGATCCACCACCTTCAGAATCGACACCTTTGCTTTCATCCAACCCAGCATCTACAGCATCCTCTGTAGCATCGTCTGTGAGATCATCATTAGCGTCGTCGTCAGCTATACGAATCGCCTCACGGTCCCCATCTGTTTCTCGTAATCACTCCCTTGCTAGTACTCCCTACATTCAGCCATCTCTTCGCTCTTCCTATCATCAATCCCCCTCCCTAAGTGTCAGCCGAAGCTCAGTAGATCTTAGAAATGCGTCCCAAAGATCACAAACTTCATATATAAATTCTCCACTTTCCAGGGGTTACCCATCTGTGTCATCCATGAATTTCAGGTACATGTCACCGCGTTTTCAAAGTCCAAGCAATGCTTCGGCAAGCTATCTCGGTTCTTCTAGTCATCAGCAGCACCCTCTTCGTTATAGTGAATCAGCTGCGAGTTTTTCTCCTTTTGCTTCTGCACAGTCCCTTCCGGAATGCTGA 1326 0.4404 MGTTNLLVFFFSLMAACYMSAAKVVLIGTNVTLSFDDIEANFAPTVKGSGECGVLYMAEPRDACTALTNKAEQLSNASNPFVLTIRGGCSFEEKVRRAQQAGFRAVIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKISGEVLKRYAGQTNIEVWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQASRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSITCAICLEDYCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLPDPPPSESTPLLSSNPASTASSVASSVRSSLASSSAIRIASRSPSVSRNHSLASTPYIQPSLRSSYHQSPSLSVSRSSVDLRNASQRSQTSYINSPLSRGYPSVSSMNFRYMSPRFQSPSNASASYLGSSSHQQHPLRYSESAASFSPFASAQSLPEC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2360 441 Gene3D - 24 156 - -
Sto8g2360 441 SUPERFAMILY RING/U-box 227 289 - -
Sto8g2360 441 Pfam Ring finger domain 233 276 IPR001841 -
Sto8g2360 441 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
Sto8g2360 441 MobiDBLite consensus disorder prediction 401 422 - -
Sto8g2360 441 Pfam PA domain 57 140 IPR003137 -
Sto8g2360 441 SUPERFAMILY PA domain 77 151 IPR046450 -
Sto8g2360 441 CDD PA_C_RZF_like 20 163 IPR044744 -
Sto8g2360 441 MobiDBLite consensus disorder prediction 282 302 - -
Sto8g2360 441 CDD mRING-H2-C3H2C2D_ZSWM2 233 276 - -
Sto8g2360 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 281 IPR013083 -
Sto8g2360 441 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 374 - -
Sto8g2360 441 MobiDBLite consensus disorder prediction 344 383 - -
Sto8g2360 441 SMART ring_2 234 275 IPR001841 -
Sto8g2360 441 PANTHER PROTEASE-ASSOCIATED (PA) RING/U-BOX ZINC FINGER PROTEIN 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2360 Sto-Chr8 15973543 15978813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2360 19 440 C3H Transcription Factor Family AT1G22670 48.372 3.96e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2360 K15692 - gmx:100791248 661.373