Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2357 ATGCCAACACCAACTCAAACTCAAAACGCACCGTTTGGTGGTACTACGCAAGCGCAAGCACAAACACAAACCGCCTCTCCTCCCAATCCCAAACACGCCCCTCGAGAATCTCGTGACCTCCCTCCTTTATTGTCCTCCTCTTACCCAATCACTCTCAAGTTCGTGGACGTGGGATACAGAGTCAAGATTGATACCAAgcaaggaggaggaagaagcatCGTCAAGCGTATGCTCTCCGCGACGACGACGTCGTCCGACGAGAGATCCACCGCGCCGCCGCAAGAGAGGACCATTCTCAACGGCATCACGGGGATGGTGTCTCCGGGAGAAATCCTCGCCGTCCTCGGCCCCTCCGGCAGCGGGAAATCCACGCTCCTCAACGCGATTGCAGGGAGGCTACTCCAAGGGCACGGCCTCACCGGAACAATCCTCGCGAACGGATCCAAGCCCACGAGGCCCATCCTGCGTCGGACGGGATTCGTCACGCAGGACGACGTGCTCTACCCTCACCTCACCGTGAGGGAGACTCTGATCTTCTGCTCCTTACTCCGCCTCCCGAGGAGTCTCTCGAAGGAGGAAAAGATCGCCGTGGTGGACGCGGTGATCGGCGAGTTAGGATTGGTGAAATGCGAGAATACAATAATCGGGAACGGGTTTATCCGAGGGGTTTCGGGAGGGGAGAGGAAGCGGGTGAGTATAGGACACGAGATGTTGGTGAACCCGAGTTTGTTGATACTGGACGAGCCGACTTCGGGGCTGGACTCCACGGCGGCGTATCGGCTCGTCACAACGCTGGGCGCGCTGGCTCAGCAGAAGGGGAAGACGGTGGTGGCTTCCATGCACCAGCCGTCGAGCCGAGTGTACCAGATGTTCGATAAGGTGCTTCTACTGTCGGAAGGGCAGTGCTTGTATTTCGGGAAGGGAAGCCGAGCCACGAGCTACTTCGAGTCCATTGGCTTCAAGCCGTCTTTTCCTATGAACCCCGCAGATTTTTTGCTTGATCTCGCTAACGGTGTTTGTCAAGTTGATGGTGTAAGTGAGAGAGATAGGCCAAACATAAAGCaaaccctaattcattcatacaACACTATACTTGCTCCCAAGGTAAAATCTACAATATGCATGGACACTCCCACTAGAAACAATACTCATAATCATCATAATACCCTAGAAATCACCTCTCCCAAAGAACATAGATATAGTGACAAAAATGATAGAATCACCCTCTCTAGCTGGTTCCACCAATTCTCCATTCTCCTCCAAAGAAGTCTCAAAGAAAGGAAACACGAGTCCTTCAATCCACTCCGAGTCTTTCAAGTCCTTGCCGCCGCCCTCCTTGCCGGCCTCATGTGGTGGCACTCTGATTACCGGGACATCCAGGACCGCCTTGGCCTcctcttcttcatctccatctttTGGGGTGTCTTCCCTTCCTTCAACTCCGTCTTCGCCTTCCCCCAGGATCGCGTCATCTTCGCGAAGGAGCGGGCCTCCGGCATGTACACGTTGTCTTCCTACTTCATGGCCCGGATTGTCGGTGACCTCCCCATGGAGCTATTCCTCCCCTTTGTTTTCCTCACCGTCACTTATTGGATGGGCGGGCTTAGGCCTGACCTATGGGCTTTTTTGCTAACCCTTTTGGTGGTCTTGGGCTATGTGCTTGTGTCTCAAGGGCTTGGGCTTTTCTTGGGGGCTTCCATAATGGACGCTAAACAAGCGTCCACTGTGGCGGCGGTGGTGATGCTGGCATTCGTATTGATTGGTGGGCTTTTGATTAACATCCAATATGGTGATGGGAAAAGGATCTCAGAATTTCTTGGATGCTCTAATAATGGTGGTAGTGGGCTTAGTGATAGGGGTAGCTGCAAGTTTGTGGAGGAAGATGTGGTGGGCCAAATAAGCCCATTGAGGAGCATTGGGGCTTTATTTATAATGTTTGTGGGTTATAGACTGTTGGCTTACCTTGCATTGAGGAGAATCAAGGGTTGA 1989 0.5153 MPTPTQTQNAPFGGTTQAQAQTQTASPPNPKHAPRESRDLPPLLSSSYPITLKFVDVGYRVKIDTKQGGGRSIVKRMLSATTTSSDERSTAPPQERTILNGITGMVSPGEILAVLGPSGSGKSTLLNAIAGRLLQGHGLTGTILANGSKPTRPILRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRSLSKEEKIAVVDAVIGELGLVKCENTIIGNGFIRGVSGGERKRVSIGHEMLVNPSLLILDEPTSGLDSTAAYRLVTTLGALAQQKGKTVVASMHQPSSRVYQMFDKVLLLSEGQCLYFGKGSRATSYFESIGFKPSFPMNPADFLLDLANGVCQVDGVSERDRPNIKQTLIHSYNTILAPKVKSTICMDTPTRNNTHNHHNTLEITSPKEHRYSDKNDRITLSSWFHQFSILLQRSLKERKHESFNPLRVFQVLAAALLAGLMWWHSDYRDIQDRLGLLFFISIFWGVFPSFNSVFAFPQDRVIFAKERASGMYTLSSYFMARIVGDLPMELFLPFVFLTVTYWMGGLRPDLWAFLLTLLVVLGYVLVSQGLGLFLGASIMDAKQASTVAAVVMLAFVLIGGLLINIQYGDGKRISEFLGCSNNGGSGLSDRGSCKFVEEDVVGQISPLRSIGALFIMFVGYRLLAYLALRRIKG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2357 662 CDD ABCG_EPDR 70 306 - -
Sto8g2357 662 MobiDBLite consensus disorder prediction 1 30 - -
Sto8g2357 662 SMART AAA_5 108 301 IPR003593 -
Sto8g2357 662 Pfam ABC-2 type transporter 415 595 IPR013525 GO:0016020|GO:0140359
Sto8g2357 662 Gene3D - 88 317 IPR027417 -
Sto8g2357 662 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Sto8g2357 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 590 660 - -
Sto8g2357 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 590 - -
Sto8g2357 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 316 IPR027417 -
Sto8g2357 662 MobiDBLite consensus disorder prediction 1 44 - -
Sto8g2357 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 324 IPR003439 GO:0005524
Sto8g2357 662 Pfam ABC-2 type transporter 281 368 IPR043926 GO:0140359
Sto8g2357 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 590 660 - -
Sto8g2357 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 23 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2357 Sto-Chr8 15939028 15945670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2357 109 278 Calmodulin-binding Proteins AT2G36910 25.000 6.55e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2357 K05681 - gmx:100812367 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2357 8 15939028 15945670 Sto8g2357 8 15939028 15945670 ECH