Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2353 ATGAAGAAGCAAAGCTTACCCTCAAATCCCTCTCTAACAAACACCTCTTCCGTTCTGCCCTATCAAACCGCGAGACTCCGAGATCACTACCTCCTCGGCAAGAAACTAGGGCAAGGCCAATTCGGCACCACGTACCTCTGCACCCAGAAATCCACGGGCAAACTCTTCGCCTGCAAATCGATCCCCAAGCGGAAGCTATTGTGCAAGGAAGATTACGACGACGTATGGAGGGAGATTCAGATCATGCATCATCTATCGGAGCACCCTAACGTGGTTCAAATCCAAGGGACGTATGAGGATTCGGTCTTCGTACACTTAGTGATGGAGCTCTGTGGCGGCGGCGAGCTCTTCGATAGGATCATCCAGAAAGGGCATTACAGTGAGAAAGAGGCCGTCAAGTTGATAAAGACCATCGTGGGCGTCGTGGAAGCTTGTCACTCTCTCGGCGTCATGCATAGGGATCTCAAACCTGAGAATTTCTTGTTTGATAATCATGGCGAAGATTCCAAGATGAAGGCTACGGATTTTGGCTTGTCTGTGTTCTACAAGCCAGGACAAGCCTTTGGTGATGTGGTTGGGAGTCCCTATTATGTTGCTCCTGAGGTGTTGTGCAAGCATTATGGACCAGAAGTGGATGTGTGGAGCGCCGGCGTTATCCTTTACATCTTACTGAGTGAAACTGAGGCAGGAATTTTCAGACAGATTTTACATGGCAAGTTAGATTTTGTGTCTGAACCATGGCCAAGCATCTCAGAAAGTGCTAAAGATTTGGTGAAACAGATGCTTGAGAGGGACCCAAAGAAAAGAATTTCTGCTCATGAAGTCTTATGTCATCCTTGGATCGTTGATGATACAGTTGCCCCAGACAAACCTTTGGATTCTGCAGTATTGTCTCGCCTGAAGCATTTCTCCGCAATGAATAAACTTAAGAAGATGGCACTACGTGTGATAGCAGAAAGACTTTCAGAAGAAGAAATTGGTGGTTTAAAAGAGTTGTTCAAAATGATTGACACGGACAACAGTGGGACAATAACATTTGAGGAACTAAAAGAAGGTTTGAAGAAAGTGGGTTCTAATTTAATGGAATCTGAAATTAAATCCCTCATGGACGCGGCTGATATAGACAACAACGGAACGATAGACTACGGTGAATTTCTTGCGGCCACACTGCACTTGAATAAGATGGAAAGAGAGGAGAATTTAGTTGCAGCCTTTTCCTATTTTGACAAAGATGGCAGTGGTTACATCACCATTGATGAGCTTCAACAAGCTTGTCAAGATTTTGGCCTTGGTGATGTACATCTTGATGAAACCATCAAAGAGATCGATCTTGACAACGATGGGAAAATTGATTATGGGGAATTTGTGGCAATGATGAAGCAGAGCGACGGAAGCGTGGGCCAGAGCCGAACCATGAAAGGcaatttaaatttcaatataagTGATGCCTTCGGAGTAGATGAGTCATCCTGA 1473 0.4474 MKKQSLPSNPSLTNTSSVLPYQTARLRDHYLLGKKLGQGQFGTTYLCTQKSTGKLFACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHLVMELCGGGELFDRIIQKGHYSEKEAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDNHGEDSKMKATDFGLSVFYKPGQAFGDVVGSPYYVAPEVLCKHYGPEVDVWSAGVILYILLSETEAGIFRQILHGKLDFVSEPWPSISESAKDLVKQMLERDPKKRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLKKVGSNLMESEIKSLMDAADIDNNGTIDYGEFLAATLHLNKMEREENLVAAFSYFDKDGSGYITIDELQQACQDFGLGDVHLDETIKEIDLDNDGKIDYGEFVAMMKQSDGSVGQSRTMKGNLNFNISDAFGVDESS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2353 490 CDD EFh 329 388 IPR002048 GO:0005509
Sto8g2353 490 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Sto8g2353 490 Gene3D - 290 464 - -
Sto8g2353 490 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Sto8g2353 490 SMART serkin_6 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2353 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Sto8g2353 490 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Sto8g2353 490 Pfam Protein kinase domain 32 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2353 490 Pfam EF-hand domain pair 329 389 IPR002048 GO:0005509
Sto8g2353 490 Pfam EF-hand domain pair 399 460 IPR002048 GO:0005509
Sto8g2353 490 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Sto8g2353 490 CDD STKc_CAMK 29 280 - -
Sto8g2353 490 SMART efh_1 434 462 IPR002048 GO:0005509
Sto8g2353 490 SMART efh_1 328 356 IPR002048 GO:0005509
Sto8g2353 490 SMART efh_1 364 392 IPR002048 GO:0005509
Sto8g2353 490 SMART efh_1 400 428 IPR002048 GO:0005509
Sto8g2353 490 Gene3D Phosphorylase Kinase; domain 1 31 116 - -
Sto8g2353 490 ProSiteProfiles EF-hand calcium-binding domain profile. 434 465 IPR002048 GO:0005509
Sto8g2353 490 Gene3D Transferase(Phosphotransferase) domain 1 117 289 - -
Sto8g2353 490 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Sto8g2353 490 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2353 490 SUPERFAMILY EF-hand 320 460 IPR011992 -
Sto8g2353 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 471 - -
Sto8g2353 490 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Sto8g2353 490 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Sto8g2353 490 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Sto8g2353 490 PANTHER BNAA09G05220D PROTEIN 14 471 - -
Sto8g2353 490 ProSitePatterns EF-hand calcium-binding domain. 337 349 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2353 Sto-Chr8 15887897 15892152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2353 1 487 EF-hand Containing Proteins AT1G35670 81.174 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto8g2353 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2353 K13412 - gmx:547887 862.833