Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2351 ATGGCTGAATATAGCAACAGCAGTGTGAAGAAGGAAAAATTGCAATCAATGCTAACCACCCTACTAGAAGATCCCATACTTACAGATGTCCCAAAGAAGCCAACCTTGGCTGATGTGGACACTCTCATCAACCTTGAGTTGGGTAGTGCCATGCGCATTTCTGTCCTCAAATTAGATGGAACTTCACTTGATGTGGCGATGATGAATTCAGCAACAGTCAAGGATTTGAAACTTGCCATTAAGAAGAAAGTAAATGACATGGAACAATCCAAGATGGGTCACCGCCATATATCTTGGAAGCACATCTGGGCAAATTATTGCTTGTCATACCATAATGAAAAGCTACTTGATGACAATTCAGCACTTCAGAATTTTGGCATACGAAATAATTCTCAGgtTCCTATTAAGGCCACTGAGGAGAGATCTTCATCAATGGTGGAGATGGAGACATGTGTACCGCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTGGGATATTATCTGAAGAGGAAGATAAACTCTCTCAAGATCAACCTTGAAGTTATTGTGGAGCTTGATCTCTACAAAATGGAACCATGGGATATACAagATAGATGCAAGCTGGGATACGAGGAGCAGAATGAGTGGTATTTCTTCAGTCACAAAGACAAGAAGTATCCGACAGGAACAAGAACAAATAGGGCAACAGCAGCAGGATTCTGGAAAGCAACAGGAAGGGACAAGGCTGTGATGTCCAAGAACAGAATCATAGGAATGAGGAAGACACTTGTGTTCTATCAAGGACGCGCTCCTAATGGCAGGAAATCTGATTGGATTATGCATGAATATCGCCTCCAAACTTCCGAGCATGCCCCTCCACAGGCAAGTATTTCATTGAGCATCTCATACTTCTCGATTGATCCTAATTAG 915 0.4186 MAEYSNSSVKKEKLQSMLTTLLEDPILTDVPKKPTLADVDTLINLELGSAMRISVLKLDGTSLDVAMMNSATVKDLKLAIKKKVNDMEQSKMGHRHISWKHIWANYCLSYHNEKLLDDNSALQNFGIRNNSQVPIKATEERSSSMVEMETCVPPGFRFHPTEEELVGYYLKRKINSLKINLEVIVELDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQTSEHAPPQASISLSISYFSIDPN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2351 304 CDD Ubl_SNRNP25 50 133 IPR040610 -
Sto8g2351 304 ProSiteProfiles NAC domain profile. 152 300 IPR003441 GO:0003677|GO:0006355
Sto8g2351 304 SUPERFAMILY NAC domain 144 286 IPR036093 GO:0003677|GO:0006355
Sto8g2351 304 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 150 287 - -
Sto8g2351 304 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 150 287 - -
Sto8g2351 304 Gene3D NAC domain 161 295 IPR036093 GO:0003677|GO:0006355
Sto8g2351 304 Gene3D - 45 145 - -
Sto8g2351 304 Pfam No apical meristem (NAM) protein 153 280 IPR003441 GO:0003677|GO:0006355
Sto8g2351 304 SUPERFAMILY Ubiquitin-like 45 134 IPR029071 -
Sto8g2351 304 Pfam Ubiquitin-like domain 51 133 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2351 Sto-Chr8 15860447 15880273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2351 148 289 NAC Transcription Factor Family AT1G71930 85.915 1.03e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g2351 NAM 5.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2351 - - gmx:100812904 288.885