Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2348 ATGCTTCGTGCTGATCTAGCTGCTGCTCCACCTGGTATTATACTGTCAAATGTAAGCTTTTCTAATAGACTTTCACCTAGTGTGGCCAAAGCAGCACGGACATTGAATGTTTCTATGAAGAAATGGATAATACATTCAACTGCACAGATAGATGATGTAATCACAAGTAGTGAAGATCAAAGTATGTGGGAAGCTTGTAGACAAGCTCTTTCTGCTTTTGATTTTAGTATTGAAGAAAAGGATAAGATACTTGGAAAAGCGTTTGGCCTCATCAATTCGCCTTATTGGGGAgaggaaaggaagaaagaagtccccaaatttgaaacAGTAAATGGAATACTAGAGTATCTGCGGAGTTTAAGTCTTTCCGACGACGATCTGTCCAAGCTGCTCAAGAAGTTTCCTGAGGTTCTTGGATGCAGCTTGGACGATGAGTTGAAAACCAACGTGCAAGTCCTGGAAAAAGAGTGGGGTATAAAAGGAAAGTCTCTTCGGAACTTACTCCTTCGAAATCCAAAAGTTCTGGGTTACAACGTTGATTGTAAGGGAGATTGTATGGCACAATGCACTCGATGCTGGGTTCGGTTCTAA 591 0.3892 MLRADLAAAPPGIILSNVSFSNRLSPSVAKAARTLNVSMKKWIIHSTAQIDDVITSSEDQSMWEACRQALSAFDFSIEEKDKILGKAFGLINSPYWGEERKKEVPKFETVNGILEYLRSLSLSDDDLSKLLKKFPEVLGCSLDDELKTNVQVLEKEWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2348 196 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 195 - -
Sto8g2348 196 Pfam mTERF 114 179 IPR003690 GO:0003690|GO:0006355
Sto8g2348 196 SMART mt_12 128 160 IPR003690 GO:0003690|GO:0006355
Sto8g2348 196 Gene3D Transcription termination factor 3, mitochondrial 34 192 IPR038538 -
Sto8g2348 196 PANTHER CGI-12 PROTEIN-RELATED 17 195 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto8g2348 mTERF 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2348 - - gmx:100797265 294.664