Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2345 ATGGATTCCACTTCTGCTCAAAACCTAGAGAATCAACCTTTAGATTCCTCAGACCAAGCTTGTCTCTCTGCTATGTTACTCAGCACCAATCAGGTGTATCCAGCTGTCCTCAACGCAGCCCTTCAACTCAACCTCTTCCACATCATCGCCGACAAGGCCGTGCCGCCCGGCTCCTTCATGTCGGCCCGTGACATCGTGGCCCACCTTCCGACCACGTCGTCGGACCACCCGGACACGGCGGATAGGGTGGACCGGCTCCTGCGCTTGCTGGCTAGCTACGCGCTCCTCACTTGTGAGTCACGCGCCGCCCATGATGGAAGCAGCAGCAGCGTCACTGTGTATGGCATTTCGGCGGTTGGCAAATACTGTCTCACTCATCAACCCGGAGGCCACGTGGCTTCCTTCGCTGCCTTCCTCGCTTACAAACCTATGTCTGAGGTTTTGATGAATTTGAAGGAAGCAGTGGTGGATGCAGAGGTTGACCTGGTGAAGAAAGTTCATGGAAAAAGCTTGTACGAGTATTTGGGAGAAGATCCGAAGTTAAACCAAATATTCAACACAGCAATGGCAGATCTATGTGCCACAGAAATGAAGAGAATCATCGAATTGTACGAAGGATTTGAGGGAATTTCAACTTTAGTTGATGTTGGAGGTGGAAATGGGGAAAACCTCAAATTCATTCTCTCTAAATACCCTTCTATTAACGCTATTAACTTCGATCTCCCACAAGTCATACACCAACCACCACCCAATATTCCTgGGATACAGCACATTGGAGGAGACATGTTTGAAAGCATTCCTAAGGGTGATGCCATAATATTAAAGAATGTGATCCATAATTGGAGAGACGAGAAATGCATAGAAATATTGAAAAAGTGTCATGAGGCATTGCCAGAAAATGGGAAGGTGATAGTGGTGGATTTCATAATGCCAGAAACACCAGAACCTTCTGAAGTATCAAAGCTTGTGTCAAACTTAGACAACATCATGTTCATCACTGtgggaggaagagaaagaacTCAGAAACAGTTCCAACGTTTGGCTCAACTTTCTGGATTTTCTAGATTCCAGGTTGCTTCTCGTGTCTTCTCTGCTTTGGGAATCATGGAGTATTACaaataa 1122 0.4572 MDSTSAQNLENQPLDSSDQACLSAMLLSTNQVYPAVLNAALQLNLFHIIADKAVPPGSFMSARDIVAHLPTTSSDHPDTADRVDRLLRLLASYALLTCESRAAHDGSSSSVTVYGISAVGKYCLTHQPGGHVASFAAFLAYKPMSEVLMNLKEAVVDAEVDLVKKVHGKSLYEYLGEDPKLNQIFNTAMADLCATEMKRIIELYEGFEGISTLVDVGGGNGENLKFILSKYPSINAINFDLPQVIHQPPPNIPGIQHIGGDMFESIPKGDAIILKNVIHNWRDEKCIEILKKCHEALPENGKVIVVDFIMPETPEPSEVSKLVSNLDNIMFITVGGRERTQKQFQRLAQLSGFSRFQVASRVFSALGIMEYYK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2345 373 SUPERFAMILY "Winged helix" DNA-binding domain 16 125 IPR036390 -
Sto8g2345 373 PIRSF O-mtase 1 373 IPR016461 GO:0008168
Sto8g2345 373 Gene3D - 2 123 IPR036388 -
Sto8g2345 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 373 IPR016461 GO:0008168
Sto8g2345 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 9 373 - -
Sto8g2345 373 Gene3D Vaccinia Virus protein VP39 126 373 IPR029063 -
Sto8g2345 373 CDD AdoMet_MTases 212 310 - -
Sto8g2345 373 Pfam O-methyltransferase domain 150 354 IPR001077 GO:0008171
Sto8g2345 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 359 IPR029063 -
Sto8g2345 373 Pfam Dimerisation domain 36 91 IPR012967 GO:0046983
Sto8g2345 373 PANTHER O-METHYLTRANSFERASE 9 373 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2345 Sto-Chr8 15804438 15806558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2345 16 363 Monolignol Biosynthesis Gene Families AT5G54160 44.000 9.43e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2345 - - gmx:100798347 468.003