Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2344 ATGGATTCCCATCATCAAGATATTGATGAAGCTAAAAGCTCAAGTGTTAATGATGAAGCATTCCTGGTTGCTTCCAATGTGGCCGTGAGTTTGGCAATGCTTGCAGTTGTGAAAGCAGCCCTAGAACTGAAGCTTGATGAACATGGCAAAGTTGAGAGAATCTATGGCCTCTCTCCCTCTGGCAGATACTTCGTGCATCGTGATGATGGAGATACTCTTGCCAATTACGTTGCCTTGGTCAATTCTCGGGTCATAGTTGATGTTtgCCTAAATTACAAGGACGCAATTCTTGATGAAGGCGATGACTTATTCGAGAAAATTAAAGGGAAGTCATTTTACCATTATCTAGAAACGGATCCAAAGCTAAGCAAGAGCTTCCATACTTCAATGGCAGATCTGTCCAACATGCACATGAAGAAAGTTCTTGAAGGATACGAAGGATTTGAGGGTATCTCAAGTTTGGTAGATGTAGGAGGAGGCAATGGAATGTGCCTCAGTATGATCCTTTCTAAATATCCTTCCATTAAGGCTATTAACTTTGATGTGCCTCATGTCATCCAAAATGCTCCATCATATCCTGGAATTGAGCATGTTAGAGGAGATATTTTTGAAAGCATCCCAAAGGGGGGTGATGCCATCATGTTAAAGTATATATGCCATAACTGGGAGGATGAAACATGCATTCAACTTTTGAAGAACTGCTACGAAGTACTGCCAGAAAAGGGGAAGGTGATAGTGATAGACTTTATAACAGCAGAAGCACCAGATTCAAGCAATGGGGCAAAGTATATTTCAAGCTTTGATATCTTTATGTTTCTATTTCCTGGTGGAAGAGAAAGGACCCTCAAAGAATTTGAGTCTCTCTGCCAATCTGCTGGTTTTTCACAATTTCACCTTGCAGCTACTGCCTTCTCTGTCTGCGGAGTTATGGAATTTCACAAGTAG 945 0.4116 MDSHHQDIDEAKSSSVNDEAFLVASNVAVSLAMLAVVKAALELKLDEHGKVERIYGLSPSGRYFVHRDDGDTLANYVALVNSRVIVDVCLNYKDAILDEGDDLFEKIKGKSFYHYLETDPKLSKSFHTSMADLSNMHMKKVLEGYEGFEGISSLVDVGGGNGMCLSMILSKYPSIKAINFDVPHVIQNAPSYPGIEHVRGDIFESIPKGGDAIMLKYICHNWEDETCIQLLKNCYEVLPEKGKVIVIDFITAEAPDSSNGAKYISSFDIFMFLFPGGRERTLKEFESLCQSAGFSQFHLAATAFSVCGVMEFHK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2344 314 Gene3D Vaccinia Virus protein VP39 123 300 IPR029063 -
Sto8g2344 314 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE-LIKE 31 314 - -
Sto8g2344 314 CDD AdoMet_MTases 154 250 - -
Sto8g2344 314 Pfam O-methyltransferase domain 93 295 IPR001077 GO:0008171
Sto8g2344 314 PANTHER O-METHYLTRANSFERASE 31 314 IPR016461 GO:0008168
Sto8g2344 314 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 314 IPR016461 GO:0008168
Sto8g2344 314 PIRSF O-mtase 10 314 IPR016461 GO:0008168
Sto8g2344 314 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 310 IPR029063 -
Sto8g2344 314 Gene3D - 26 141 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2344 Sto-Chr8 15793315 15796310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2344 11 306 Monolignol Biosynthesis Gene Families AT5G54160 47.475 1.84e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2344 K13066 - qsu:112031144 322.783