Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2343 ATGGattctcatcatcatcaagaCATTGAAGAAGCTAAAAGCTCGAGTGTTGATGATGAAGCATTCCTGGTTGCTTCCAATGTGGCCATGAGTTTGGCAGTGCTTGCAGTTCTGAAAGCAGCCATAGAATTGAAGCTGTTTGATATCATTGCAAGAGATCCTAAGATGATGATGACGCCTTCCCAAATTGCTTCTCACGTTCCTCTTTCCCAATACCCCAATTTGCCTCGCAAGCTTGATCGAATGCTTCGTCTTCTCGCTAATCACTCACTTCTCACTTGCTCTTTGAAAAGTGATGACGACGAACATGGCGAAGTTGAGAGAATCTATGGCCTCTCTCCCGCTGGCAGATACTTTGTGCATCGTGATGATGGAGACACTCTTGCCAATTACGTTCGCATGGTCAATTCTCGGGTGATTATTGATGTTTgCCTAAATTACAAGGACGCAATTCTTGATGAAGGCGATAACTTGTTCGAGAAAATTCATGGGAAGCCAATGTACCATTATCTAGAAACAGATGCAGAACTAAGCAAGAGCTTCCATACTTCAATGGCAGATCTGTCCTacatggagatgaagaaaatTCTTGAAGGATACGAAGGATTTGAGGGTATCTCAACTTTGGTAGATGTAGGAGGAGGCAATGGAATGTGCCTTAGCATGATCCTTTCTAAATATCCTTCCATTAAGGCTATTAACTTTGATGTGCCCCGTGTCATCCAAAATGCACCATCATATCCTGGAATTGAGCATGTTGGAGGTGATGCCATCATGTTAAAGTATATATGCCATAACTGGGAGGATGAAACATGCATTCAACTTTTGAAGAACTGCTACGAAGTACTGCCAGAAAAGGGGAAGGTGATAGTGATAGACTTGATAACAGCAGAAGCACCAGATTCAAGCAATGGGGCAAAGTATATTTCAAGCATGGATAACTTTATGTTTTTCTGTCCTGGTGGAACCCTCAAAGAATTTGAGTCTCTCTGCCAATCTGCTGGTTTTTCACAATTTCACCTTGCAACTACTGCCTTCTCTGTCTACGGAGTTATGGAATTTCACAAGTAG 1071 0.4099 MDSHHHQDIEEAKSSSVDDEAFLVASNVAMSLAVLAVLKAAIELKLFDIIARDPKMMMTPSQIASHVPLSQYPNLPRKLDRMLRLLANHSLLTCSLKSDDDEHGEVERIYGLSPAGRYFVHRDDGDTLANYVRMVNSRVIIDVCLNYKDAILDEGDNLFEKIHGKPMYHYLETDAELSKSFHTSMADLSYMEMKKILEGYEGFEGISTLVDVGGGNGMCLSMILSKYPSIKAINFDVPRVIQNAPSYPGIEHVGGDAIMLKYICHNWEDETCIQLLKNCYEVLPEKGKVIVIDLITAEAPDSSNGAKYISSMDNFMFFCPGGTLKEFESLCQSAGFSQFHLATTAFSVYGVMEFHK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2343 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 353 IPR029063 -
Sto8g2343 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 356 IPR016461 GO:0008168
Sto8g2343 356 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Sto8g2343 356 PANTHER O-METHYLTRANSFERASE 15 356 IPR016461 GO:0008168
Sto8g2343 356 Pfam Dimerisation domain 37 87 IPR012967 GO:0046983
Sto8g2343 356 Gene3D Vaccinia Virus protein VP39 121 356 IPR029063 -
Sto8g2343 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Sto8g2343 356 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 15 356 - -
Sto8g2343 356 Pfam O-methyltransferase domain 148 337 IPR001077 GO:0008171
Sto8g2343 356 Gene3D - 1 119 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2343 Sto-Chr8 15789654 15791643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2343 17 348 Monolignol Biosynthesis Gene Families AT5G54160 45.797 1.13e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2343 K13066 - qlo:115963914 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2343 8 15789654 15791643 Sto8g2343 8 15789654 15791643 ECH