Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2338 AtggaagatccagaggaagagGAGCTTCTCAATCTCACCCTCGCCGTCTCTGCATCAGGTAGATCAGagaggaaaaagaaagggaaattcATCCCCAGGGATCAGTACCACCACCATTATAATCATCAcattatcaataataataataatgatcacaaccatcatcatcataatcataataataattgctTATCCTACGAAGCCAAGATCTTCAAGCTCCTCCAAATGCGAGAGCAGATGCTACGCCtagaccaccaccaccaccaccatgtcTTGAGAGCCAAAGACGGCGGCGCTCTCATCCACCTCCTCCTCAGCACCGCCACCTCCGTGGACGACACCAACCTCAACGCCGCCCTCGACCACCTCTCCGACCTCTACCAAACGGTCTCCCTCACCGGCGACTCCGTCCAGCGCGTGGTGGCCTACTTCGCGGACGGCCTCTCCGCCCGCCTCCTCACCCGCAACTCCCCCTTCTACCACATGCTCATCGACGAGCCCACCTCCGACGAGGAATTCCTCGCCTTCACCGACCTCTACCGCGTCTCCCCTTACTACCAATTCGCCCACTTCACCGCCAACCAAGCCATACTCGAGTCCTTCGAGCGCGAGGAGCACCGCAACAACCGCGCCCTCCACGTCATCGACTTCGACGTCCCGTCCTACGGCTTCCAGTGGCCCTCCCTCATCCAATCCCTCTCCGACAAGGCCTCCTCCGGCAACCGCATCTCCCTCCGCATCACCGCCTTCGGCTCCAACCTCAAACTCCTCCAGGACACCGAGTCCCGCCTCCTCACCTTCGCCAAGTCCTTCTCCCACCACCTCGTCTTCGAGTTCCAAGGCCTCCTCCGCGGCTCCCGCGTCATCAACCTCCGCAAGAAGAAGAACGAGACCGTCGCCGTCAACCTCGTCTCCTACCTCAACACCCTCAGCAGCTTCATCAAGATCTCCGACACCCTCGCCTTCGTCCACTCCCTCAACCCCTCCGTCGTCGTCTTGGTCGAGCAAGAAGGCGGCGCCGCCTccgccaccgccgccgccgcgaATTCTTTCCTCCCGCGGTTCACGGACGCGCTGCATTACTTCGCGGCCATGTTCGACTCGCTGGACGATTGCCTGCCGTTGGATAGCGCGGAGAGGTTGAGGATCGAGAGGAAGCTTCTAGGGAAGGAGATCAAGGCGATGCTGAACGACTACGACGTGGAGGGCGTGGATTGCCCCAAGTACGAGAGGATGGAGACGTGGAAGGCGAGGATGGAGAGCCATGGGTTTGTGGCCACCAAGATTAGCTCCAAGGCTTTGATTCAAGCCAAGCTGCTTCTGAAGATGAGGACGCATTATTGCCCCGTAATACAGTTCGAGGCCGAGGACGATGGCGGCGGCGGCGGGGGAGGGGGATTCAGGGTTTCAGAGAGGGACGAAGGAAGAGCCATGTCTTTGGGATGGCAGAATAGAGACCTAGGCTAG 1467 0.5385 MEDPEEEELLNLTLAVSASGRSERKKKGKFIPRDQYHHHYNHHIINNNNNDHNHHHHNHNNNCLSYEAKIFKLLQMREQMLRLDHHHHHHVLRAKDGGALIHLLLSTATSVDDTNLNAALDHLSDLYQTVSLTGDSVQRVVAYFADGLSARLLTRNSPFYHMLIDEPTSDEEFLAFTDLYRVSPYYQFAHFTANQAILESFEREEHRNNRALHVIDFDVPSYGFQWPSLIQSLSDKASSGNRISLRITAFGSNLKLLQDTESRLLTFAKSFSHHLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSSFIKISDTLAFVHSLNPSVVVLVEQEGGAASATAAAANSFLPRFTDALHYFAAMFDSLDDCLPLDSAERLRIERKLLGKEIKAMLNDYDVEGVDCPKYERMETWKARMESHGFVATKISSKALIQAKLLLKMRTHYCPVIQFEAEDDGGGGGGGGFRVSERDEGRAMSLGWQNRDLG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2338 488 Coils Coil 378 398 - -
Sto8g2338 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 484 IPR005202 -
Sto8g2338 488 Pfam GRAS domain family 100 487 IPR005202 -
Sto8g2338 488 ProSiteProfiles GRAS family profile. 91 488 IPR005202 -
Sto8g2338 488 PANTHER OSJNBA0084A10.13 PROTEIN 44 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2338 Sto-Chr8 15735469 15737114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2338 91 487 GRAS Transcription Factor Family AT2G04890 31.034 2.12e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto8g2338 GRAS 4e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2338 - - gmx:100813979 656.366