Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2324 ATGGCTGCTTCTTCCGCCGGCAATGCCTTTTCAACTTCTGCCTCTGCTTTCCCTCGCGAACCGTTGGATTTCTCGCCTGATTCCCCCCGGCCAATCCCTCTCACGTCCGATCAGCTCAAGTACTGCACCGAAGCGTTAGCCTTCTTCAGGGAGAAGCTCCGGACTCCTCACAAGATCGGTGATGAGTTTTCACGCTTGCAGGCAAATAGGATAACGCCAAGTGAGATGAAGACGAGATGCACTACAGCTTTTCATGAAGTAAATGTGAGCAAAAATCGGTATTCAGATGTCGTACCATTTGACAACAACAGGATTGTTCTTGAATCAAGTACGGATTATAGACCTACAGCAAAAGGATATATCAATGCAAGCTTTGTTTCGACCTCTTCCCCTGGAAATGTTTCTCAGTTTATAGCTACACAAGGCCCCCTGCCAAACACTTATGAGGATTTCTGGGAAATGGTTATCCAATATCACTGTCCTGCAATTGTGATGCTAACTAGGCTGGTTGACAATTACCACTACAAGATGGTAAAATGTGGAAATTATTTTGAAGCTGAAGATGGACCCAGAGAATTCGGTAATATCTCTATTATCAGTAAATGGATTAAAACTACTGAAACTTCATTGGTACTGCGTCACTTGGAGGTGAAACATGCAGAGCCAGAGGATTTGCCCTTGTCTGTTTTGCATGTTCAATATCCTGAATGGCCTGACCATGGAGTTCCCAAAGATACATATGCAGTTCGTGAAATCTTGAAAAGATTATACCATTTACCACCAAACCTTGGCCCAATAGTGGTTCACTGCAGTGCAGGTATTGGCAGAACGGGAACATACTGCACTGTTCACAACACTATTCAGAGAATCCTTGCTGGTGATATGTCTGCTTTGGATCTTGTAAATACCATAGCTGTCTTTAGGTCCCAGCGTATTGGAATGGTTCAGACACAGGAGCAGTACTTTTTCTGCTATAAAGTTATTGTAGATGAACTGGAAGACCTTGTATCTCATCAGCAATGA 1023 0.436 MAASSAGNAFSTSASAFPREPLDFSPDSPRPIPLTSDQLKYCTEALAFFREKLRTPHKIGDEFSRLQANRITPSEMKTRCTTAFHEVNVSKNRYSDVVPFDNNRIVLESSTDYRPTAKGYINASFVSTSSPGNVSQFIATQGPLPNTYEDFWEMVIQYHCPAIVMLTRLVDNYHYKMVKCGNYFEAEDGPREFGNISIISKWIKTTETSLVLRHLEVKHAEPEDLPLSVLHVQYPEWPDHGVPKDTYAVREILKRLYHLPPNLGPIVVHCSAGIGRTGTYCTVHNTIQRILAGDMSALDLVNTIAVFRSQRIGMVQTQEQYFFCYKVIVDELEDLVSHQQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2324 340 CDD PTPc_plant_PTP1 120 325 - -
Sto8g2324 340 ProSitePatterns Tyrosine specific protein phosphatases active site. 268 278 IPR016130 GO:0016311|GO:0016791
Sto8g2324 340 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 250 322 IPR000387 GO:0016311|GO:0016791
Sto8g2324 340 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 14 338 - -
Sto8g2324 340 SMART PTPc_3 58 333 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 MobiDBLite consensus disorder prediction 1 30 - -
Sto8g2324 340 Pfam Protein-tyrosine phosphatase 88 329 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 ProSiteProfiles PTP type protein phosphatase domain profile. 59 331 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 MobiDBLite consensus disorder prediction 1 15 - -
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 119 126 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 137 157 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 227 244 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 265 283 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 298 313 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 PRINTS Protein tyrosine phosphatase signature 314 324 IPR000242 GO:0004725|GO:0006470
Sto8g2324 340 SMART ptp_7 228 330 IPR003595 -
Sto8g2324 340 Gene3D Protein tyrosine phosphatase superfamily 35 333 IPR029021 -
Sto8g2324 340 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 14 338 - -
Sto8g2324 340 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 38 333 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2324 4 337 Protein tyrosine phosphatase (PTP) family AT1G71860 66.766 1.84e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2324 - - gmx:548044 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2324 8 15637319 15642980 Sto8g2324 8 15637319 15642980 ECH