Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2288 ATGGAAGAACCACCCTCCACCACCCTCGTCACCGGCGGAGGCTCCACCACAGCACCGGCAACCTACCGGGGCGTTCGCATGAGAAAATGGGGCAAATGGGTGTCCGAAATCCGGGAGACCGGCGCCAAGACCCGAATATGGTTAGGGAGTTACGAGGCGCCAGAGATGGCAGCCGCGGCGTATGACGTGGCAGCTTTACAGCTGCGGGGCCGAGCGGCCCGGCTCAATTTCCCGGAGCTCGCGGGGAGCCTGCCCCGGCCCGCGAGCTCGCGGGCGGAGGACGTGCAGTTGGCAGCTCAGCAAGCAGCATTGAGGATGAAGAGACCACCGGTGGCGGTCAAAGGGTTGTTGCCGGAAGCAGGTGGTGCGGCGGTGTCGGCAGTGCCGGTGACGGTGGGGCTGTCGGCGAGTCAAATTGAGGCCATAAATGAGTGGCCATTGGATTCACCAAAGATGCTACTGCCATCAAAACATGCAGAAGCCATTggatttttcattttagtggCACTAATGTCAAACTTTTTGACTTGTGTGACTTATCCATGA 546 0.5824 MEEPPSTTLVTGGGSTTAPATYRGVRMRKWGKWVSEIRETGAKTRIWLGSYEAPEMAAAAYDVAALQLRGRAARLNFPELAGSLPRPASSRAEDVQLAAQQAALRMKRPPVAVKGLLPEAGGAAVSAVPVTVGLSASQIEAINEWPLDSPKMLLPSKHAEAIGFFILVALMSNFLTCVTYP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2288 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 152 - -
Sto8g2288 181 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 PRINTS Ethylene responsive element binding protein signature 60 80 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Sto8g2288 181 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 Pfam AP2 domain 22 70 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Sto8g2288 181 Gene3D AP2/ERF domain 21 79 IPR036955 GO:0003700|GO:0006355
Sto8g2288 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 20 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2288 Sto-Chr8 15348612 15349504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2288 19 158 AP2-EREBP Transcription Factor Family AT1G71450 52.857 2.84e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g2288 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2288 - - zju:107421431 179.489