Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2265 ATGAGGATGAGCTGTAATGGATGCCGAGTGTTGAGAAAAGGATGTAGTGAGAATTGCAGCATAAGGCCGTGTTTGGTATGGATCAAAAGCCCCGAGTCTCAAGCCAATGCTACTGTGTTTCTCGCTAAGTTCTACGGTCGCGCTGGCCTTATGAATCTCATCAACGCTGGTCCCGAACACCTTCGTCCTGCGATTTTTCGTTCGTTGCTGTATGAAGCATGCGGGAGGATAGTGAACCCGATTTACGGCTCCGTTGGCTTGTTGTGGTCTGGGAGCTGGCAGCTCTGCCAAGCCGCCGTGGAAGCCGTGTTGAAAGGCGCGCCGATCACGCCGATTACCTCCGAGGCCGCCACGACTGGGCGGGGCCCACCTCTCAAGGCTTATGATATCCGCCACGTGTCCAAGGATGAGAACTCGGCCGCGTCCAGCGATCCTCATCAGCGACCGAAGACGACTCGGTCCCGGTTCAAGCGCTCCGGGAAGCCGAAAGCCGACAAGGGAGTGGAGTCCGTCGTCCAACCGGGTCCGGCCGCGGCTGCCCCGATGATTAATGCGTGGGCCGAGGAGGTGGCGAACCGGTCGGCGAGTCACGAGTCATCGGTGAGTCACCAGTCGGAGGCGGCGAACGAGAGCAAAGAGAGCGAGAGCATGATCTCTGTGGAGACCGCGGAGACGTCGGTTCTCTTCCGAGACGAACCGGAGTCGACCGGGAAAGGGAGCGACGAgagtggtggtggaggaggagatGTTGTTGGGTTGGAATTGACGCTCGGGTTGGAACCGGCGTCACGTGCGAATCACGTGGTGCCgatgaagaagaggaagatcGAGTTCAGGGATAGTGAGAAATGCAAGAAGGAGTGTGTAATATCGGAGAAGAGAAACATATTACCTTTTTTTTGGGGGGTGGTTTTCCTGTGA 921 0.5472 MRMSCNGCRVLRKGCSENCSIRPCLVWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATTGRGPPLKAYDIRHVSKDENSAASSDPHQRPKTTRSRFKRSGKPKADKGVESVVQPGPAAAAPMINAWAEEVANRSASHESSVSHQSEAANESKESESMISVETAETSVLFRDEPESTGKGSDESGGGGGDVVGLELTLGLEPASRANHVVPMKKRKIEFRDSEKCKKECVISEKRNILPFFWGVVFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2265 306 MobiDBLite consensus disorder prediction 135 171 - -
Sto8g2265 306 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Sto8g2265 306 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Sto8g2265 306 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 286 - -
Sto8g2265 306 PIRSF AS2 1 295 IPR017414 -
Sto8g2265 306 MobiDBLite consensus disorder prediction 190 249 - -
Sto8g2265 306 MobiDBLite consensus disorder prediction 193 223 - -
Sto8g2265 306 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2265 Sto-Chr8 15131636 15132808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2265 1 287 AS2 family AT3G02550 59.450 3.76e-107 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g2265 LOB 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2265 - - lja:Lj1g3v3317390.1 376.711