Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2258 ATGGATCCTCCTCTTCACCCATATTCCATTATTTTGCTTGTCTTAGTCCCATCATTTTTCATCTCCAATTCTGTTTCTGCTGATGTTTCACAGTACAACAATTGCAGTGCCCCATACAGTTGTGGAGTCGTCAAGAACGTTACCTATCCATTCTGGGGAGACAACAGAGCAGACTACTGTGGACACCCTGATTTTCAGCTCAAATGTGACAGTAACGTCCCCAAATTAATCGGCGTCGCCGCGTCGTTTCGGATTCTGAGTTTGAATTTTTCTGATCGGAATATGACTGTGGCTAGGGATGATTATTGGGACACAAATTGTCCATCTGATAGAAGAAACAATAGCTTGGATCCCAGCATCTTCAAATTGTGGGATGGGCTTCAGAATATGGCGTTGCTGTATGATTGTATTAATAGTTTTAGCCCAGGTGCCATATTTGAGACAACAAATTGCCAAGATAATTCAGGCAAGAATTTGTACTATGGCAACGAATCTTTGAGTAATGATCTTGAAGGAGTTTGCAGCGTTGTTATTATGCCTCTTTTTGAGACGTATTTTGAGGAGGTATACGGCGGTCAAATATCCCTCCAGCAAGCAATAAAGGATGGGTTTGGAATGTCATGGGGTGTTAATATTGAGGAGTGTGATGGTTGCGTCAATTCTGGTGGTCAGTGTGGGTATAGTGCGGGGAAATTCACCTGTTTCTGCCCGAACGGAAGTCAAGGAGATTCATGTGCTTCGTCTTCAGGATCATCTTCCAAGCTGGGTATTATAATAGGTGTGTCTGCTAGTTGCATTGGGATAGTCATAATCTTGATTGTGATAATTTGGAACCGTAAAAGGTGTTTCAAATTAGGACAAACATATATTTCCAATGCAAGAGGAAAATCCCATGATCATCACCAAGTTGAGATATTCATGCAAACTTATGGCACTTGGCTACCAAGGAGATTCACTTACTCACAAGTGAAAAGAATGACAAAGTCATTCACAACAAAGATAGGTCAAGGAGGTTATGGAATTGTGTATAAAGCAATTATGCCTGATGGTCGTGTTGTGGCGGTAAAAGTATTGAGTGAGTCTAAAAGCAACGGCGAAGAATTTATAAATGAAGTTGCGAGTATAAGTAGAACATCTCATGTCAATATAGTCTCTTTACTGGGATTTTGTTACGAGAAGAATAAACGAGCGTTGATCTATGAATTCATGACGAATGGCTCATTGGACAAATTCATTCATAAAGGAGATTCCTCAAATGCAATTTGTGATTTGGAATGGTTGAAAATGTACCAAATTGCAATCGGTATCGCTCGAGGGCTAGAATACTTGCATCAAGGATGTAACACGAGAATTCTCCATCTCGATATCAAACCACAAAACATCTTGCTGGACGAAGATTTCTGTCCAAAAATATCCGATTTTGGCCTCGCCAAAATATGCCAAAAGAAGGAGAGTATCGTATCGATATTCGGTACGAGGGGAACCATAGGTTACATTGCACCAGAAGTATTCAGCCGAAGCTACGGTGGAGTTTCGTACAAATCCGATGTTTATAGTTACGGAATGTTGGTCCTTGAAATGATCGGAGGAAGGAAGAATTTTGAGAGTAGTGGAGGGTCACAATATTCTAGCGAAATGTATTTTCCGGATTGGATTTATAAGGAGCTTGAGGAATGTAAGGTAAATATGTGCATAAGTGAAGAGGAAAATGAGGTGATAAGGAAAATGACTTTGGTTAGTTTATGGTGCATTCAAGTAAAGCCATCGGATAGGCCTTCAATGAATAAAGTAGTAGAAATGTTAGAAGGAGATATTCAATCTTTGCCATTTCCACCAAAACCTTCCCTATGTTCTCCTCAAAGGACACCCGTTCAGTTTTCAGATGTAGCTTCTACCACTTTGAATGATTCAAATTCAAGGTCCAACCAAAAAGATTGA 1938 0.4009 MDPPLHPYSIILLVLVPSFFISNSVSADVSQYNNCSAPYSCGVVKNVTYPFWGDNRADYCGHPDFQLKCDSNVPKLIGVAASFRILSLNFSDRNMTVARDDYWDTNCPSDRRNNSLDPSIFKLWDGLQNMALLYDCINSFSPGAIFETTNCQDNSGKNLYYGNESLSNDLEGVCSVVIMPLFETYFEEVYGGQISLQQAIKDGFGMSWGVNIEECDGCVNSGGQCGYSAGKFTCFCPNGSQGDSCASSSGSSSKLGIIIGVSASCIGIVIILIVIIWNRKRCFKLGQTYISNARGKSHDHHQVEIFMQTYGTWLPRRFTYSQVKRMTKSFTTKIGQGGYGIVYKAIMPDGRVVAVKVLSESKSNGEEFINEVASISRTSHVNIVSLLGFCYEKNKRALIYEFMTNGSLDKFIHKGDSSNAICDLEWLKMYQIAIGIARGLEYLHQGCNTRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSIFGTRGTIGYIAPEVFSRSYGGVSYKSDVYSYGMLVLEMIGGRKNFESSGGSQYSSEMYFPDWIYKELEECKVNMCISEEENEVIRKMTLVSLWCIQVKPSDRPSMNKVVEMLEGDIQSLPFPPKPSLCSPQRTPVQFSDVASTTLNDSNSRSNQKD 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2258 645 Gene3D Phosphorylase Kinase; domain 1 287 402 - -
Sto8g2258 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Sto8g2258 645 Gene3D Transferase(Phosphotransferase) domain 1 403 608 - -
Sto8g2258 645 Pfam Protein kinase domain 332 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2258 645 PANTHER - 20 633 - -
Sto8g2258 645 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Sto8g2258 645 ProSiteProfiles EGF-like domain profile. 211 246 IPR000742 -
Sto8g2258 645 CDD STKc_IRAK 334 603 - -
Sto8g2258 645 SUPERFAMILY Protein kinase-like (PK-like) 306 602 IPR011009 -
Sto8g2258 645 Pfam Wall-associated receptor kinase C-terminal 163 238 IPR032872 -
Sto8g2258 645 ProSitePatterns EGF-like domain signature 1. 234 245 IPR000742 -
Sto8g2258 645 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2258 645 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 633 IPR045874 GO:0004672
Sto8g2258 645 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2258 645 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2258 Sto-Chr8 15012993 15015926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2258 8 636 Receptor kinase-like Gene Family AT1G66910 42.965 2.02e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto8g2258 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2258 - - aprc:113862598 660.603