Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2255 ATGTCCTCCGATCTCTCTGTTATTCTTCCTCGAGTTTTAATCGTCTCCAGACGAAGCGTTCGCAAGAACAAGTTCGTCGATTTCGTAGTGAAGGTGAAGCACATAAACTATGAGGATTATGATGGGCATAGGCATGAGGTGAAGGTGGTGGAGAATACACCATTGGAATGGTGGTTCAAGGAGATGAAGATTTGGGTGAATAGTTATCATCATCAAGGGGTGAAGACATTGGCCCAAAGGTTTGTTCCAATGGCCTATGCTGAAGATGGTTTGATTGAAGGGTTTTATGATCCGGATGCTTATAATCCTGAAGAAGGAAAGTTTATTATGGGCTTGCAGTTTCATCCTGAGCGTATGAGGAAGCCAGCTTCTGATGAATTTGATTATCCTGGATGCCCTTTTGCTTATAAGGAATTTGTGAAGGCGGTAATAGCATATCAGAAGAAGATGAATGCATTGACATCAATAGAGAAGCCTATGAAGCTTAATAAAGAAATGGAGACCAAAAGAAATATTATAGTCCGAAGCTTCTCAATAGCCAAAGATCTCTACACTTCAGGGCGTGCCATGTGTTCCTTCCAACAATCTCAAGAACTAGAAGCTGGTGCAGAATTTCTTGagTCAAACACAGCGTTGAGTGTGGAGCAAGAGAAAAGGCTGAAGCAAATGGGAGCAACAGTGAGGAATGGAGGTGCCCCATTCAACTGTGGTGGCATCGTCAAGAACGTTACCTATCCATTCTGGGGAGACAACAGAGCAGACTACTGTGGACACCCTGATTTTCAGCTCAAATGTGACAGTAACGTCCCCAAATTAATCGGCGGCGCCGCGTCGTTTCGGATTCTGAGTTTGAATTTTTCTGATCGGAATATGACTGTGGCTAGGGATGATTATTGGGACACACTTTGTCCATCTGATAGAAGAAACAATAGCTTGGATCCCAGCATCTTCAAATTGTGGGATGGGCTTCAGAATATGGCGTTGCTGTATGATTGTATTAATAGTTTTAGCCCAGGTGCCATATTTGAGACAACAAATTGCCAAGATAATTCAGGCAAGAATTTGTACTATGGCAACGAATCTTTGAGTAATGATCTTGAAGGAGTTTGCAGCGTTGTTATTATGCCTCTTTTTGAGACGTATTTTGAGGAGGTATACGGCGGTCAAATATCCCTCCAGCAAGCAATAAAGGATGGGTTTGGAATGTCATGGGGTGTTAATATTGAGGAGTGTGATGGTTGCGTCAATTCTGGTGGTCAGTGTGGGTATAGTGCGGGGAAATTCACCTGTTTCTGCCCGAACGGAAGTCAAGGAGATTCATGTGCTTCGTCTTCAGGTGGTAAATCTAGCAAATCAGCTGTTGCAATAGGTGTGGGTGTTGCGGTTGCAGCCGTTGTTGGCATTCTTCTTGGATGTTGGTTATACTTCTGTGTGAAGCGAAGGAAAAGAATTGCTAGAGCTGAACAGTTGAAAAGCAAGGACCTCCTCAGTCCTCCTTCAAGCAAAGATGCTTTTATATCTACAACTACTACGTCTCAAAGTGCTTTTACCACTACAACTAGTATGTCTCAAAGTGTCCCCTCTTACCCCTCCTCCAAGATTAACACTGTGCCAAAGAGTTTCTACTTTGGAGTTCAAGTGTTTACTTATGCTGAACTGGAAGAAGCTACTAAAAATTTTGATCCTTCTATGAAGATTGGAGAAGGAGGTTTTGGCTCTGTTTATTATGGAAACCTCAATGATGGACGTGTAGTTGCAGTAAAACGCCATTATGAAAGCAATATGAAACTAATGAAACAGTTCATGAACGAAGTTGAGATTCTAGGTCACTTACGGCATGAAAACCTGGTGGCTCTCTATGGATGCACTTCCAGACATAGCCAAGAACTTCTCCTAGTGTATGAGTACATTCCTAATGGAACAGTGTCTGACCATCTCCATGGTAAGCGAGCACAATCTATTTCTCTTCCTTGGCCTATACGAATGAACATAGCAGTAGAAACAGCCGAAGCTCTTGCCTACCTCCACAAATCAGATGTCATCCACCGTGATGTTAAAACCAACAATATTCTCCTGGACAACAGTTTTCGTGTGAAGGTAGCTGATTTCGGTCTCTCACGCATTTACTCACAAGGTGTCACGCATGTGACAACTGCTCCACAAGGAACCCCTGGGTATGTGGACCCTGAGTATTACCGGTGCTACCAACTCACTGATAAAAGCGATGTTTATAGCTTTGGTGTGGTCCTAGTTGAGCTTATATCATCCTTGGAAGCTGTGGATGTTAACAGGCAAAACCGTGACATAAATTTAGCTAACATGGCCATCAATAAGATTCAGGACAATGCAGTGCACGAGTTGGTCGATCCATTCCTCGGATTCAAAACAGACTATGCGGTGAGGCAGATGACAACGGCAGTGGCGGAATTGGCATTCAGGTGTTTGCAGCAGGAGAGAGACATGAGACCATCCATGAATGAGGTAGTTGAGGTGCTGAGAGGTATCCAGAGTCAAGAGTATGTGCAGGAAGCAGAAGTGTTGGATAAGGCTGATGAAATTATACTTCTGAAAGATGCTCCTCCTGGCCCATTTTCGCCAAATTCGGTTTGTGATAAATGGGTTAGCAGCTCTTCTGTACACAATTCCTCATAG 2652 0.434 MSSDLSVILPRVLIVSRRSVRKNKFVDFVVKVKHINYEDYDGHRHEVKVVENTPLEWWFKEMKIWVNSYHHQGVKTLAQRFVPMAYAEDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRKPASDEFDYPGCPFAYKEFVKAVIAYQKKMNALTSIEKPMKLNKEMETKRNIIVRSFSIAKDLYTSGRAMCSFQQSQELEAGAEFLESNTALSVEQEKRLKQMGATVRNGGAPFNCGGIVKNVTYPFWGDNRADYCGHPDFQLKCDSNVPKLIGGAASFRILSLNFSDRNMTVARDDYWDTLCPSDRRNNSLDPSIFKLWDGLQNMALLYDCINSFSPGAIFETTNCQDNSGKNLYYGNESLSNDLEGVCSVVIMPLFETYFEEVYGGQISLQQAIKDGFGMSWGVNIEECDGCVNSGGQCGYSAGKFTCFCPNGSQGDSCASSSGGKSSKSAVAIGVGVAVAAVVGILLGCWLYFCVKRRKRIARAEQLKSKDLLSPPSSKDAFISTTTTSQSAFTTTTSMSQSVPSYPSSKINTVPKSFYFGVQVFTYAELEEATKNFDPSMKIGEGGFGSVYYGNLNDGRVVAVKRHYESNMKLMKQFMNEVEILGHLRHENLVALYGCTSRHSQELLLVYEYIPNGTVSDHLHGKRAQSISLPWPIRMNIAVETAEALAYLHKSDVIHRDVKTNNILLDNSFRVKVADFGLSRIYSQGVTHVTTAPQGTPGYVDPEYYRCYQLTDKSDVYSFGVVLVELISSLEAVDVNRQNRDINLANMAINKIQDNAVHELVDPFLGFKTDYAVRQMTTAVAELAFRCLQQERDMRPSMNEVVEVLRGIQSQEYVQEAEVLDKADEIILLKDAPPGPFSPNSVCDKWVSSSSVHNSS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2255 883 Pfam Wall-associated receptor kinase C-terminal 359 434 IPR032872 -
Sto8g2255 883 Pfam Peptidase C26 32 117 IPR011697 GO:0016787
Sto8g2255 883 SUPERFAMILY Class I glutamine amidotransferase-like 41 148 IPR029062 -
Sto8g2255 883 Pfam Protein kinase domain 563 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2255 883 Pfam Wall-associated receptor kinase galacturonan-binding 235 294 IPR025287 GO:0030247
Sto8g2255 883 SUPERFAMILY Protein kinase-like (PK-like) 540 838 IPR011009 -
Sto8g2255 883 ProSiteProfiles EGF-like domain profile. 407 442 IPR000742 -
Sto8g2255 883 ProSitePatterns EGF-like domain signature 1. 430 441 IPR000742 -
Sto8g2255 883 ProSiteProfiles Protein kinase domain profile. 560 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2255 883 Gene3D Transferase(Phosphotransferase) domain 1 637 850 - -
Sto8g2255 883 CDD STKc_IRAK 566 835 - -
Sto8g2255 883 ProSitePatterns Protein kinases ATP-binding region signature. 566 588 IPR017441 GO:0005524
Sto8g2255 883 SMART serkin_6 560 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2255 883 Gene3D Phosphorylase Kinase; domain 1 533 636 - -
Sto8g2255 883 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 232 874 IPR044652 -
Sto8g2255 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Sto8g2255 883 PANTHER - 232 874 - -
Sto8g2255 883 Gene3D - 14 154 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2255 Sto-Chr8 14989895 15000883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2255 225 883 Receptor kinase-like Gene Family AT1G25390 41.435 2.54e-148 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto8g2255 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2255 - - gmx:100811407 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2255 8 14989895 15000883 Sto8g2255 8 14989895 15000883 ECH