Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2249 ATGGAAAACCAAAAGATGAATGCTTCTTCAATTTCTGCCCCATCATCACCAGAGCTAGGTCTTTCAATCTCTCCAACTCGCATGGGAGTCAATTTTGATGACTTGGAGATATTCGAAGAAAGTCGAGTTGTGCTCGAAAAAGCAACGGAGATCTTCATCGAAGAACTCAGCCTTCGTGCGTGGTATCGAACTGGAGAGAAGAACAAGAACACTATTGAGAGAAATGATTTTGCTGAAgaaattaatgaaaacaaaGTCTATGACTTCTTAGCTGATATTGTTCCAATGGATCCCAATGACCATCCCTCAAACGTTAAGGAAGAACATTGTGGAATTATAACTGTTGAAGAAGTTACTAATTCTGCTGAGGCCCCTGTGATGAATGTGGGCAATGCCAAAGTACCACAGGTTGGTCATAATGGTGTTATGCTATCTATGTAA 441 0.3968 MENQKMNASSISAPSSPELGLSISPTRMGVNFDDLEIFEESRVVLEKATEIFIEELSLRAWYRTGEKNKNTIERNDFAEEINENKVYDFLADIVPMDPNDHPSNVKEEHCGIITVEEVTNSAEAPVMNVGNAKVPQVGHNGVMLSM 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2249 146 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 39 111 - -
Sto8g2249 146 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g2249 146 Gene3D Histone, subunit A 30 97 IPR009072 GO:0046982
Sto8g2249 146 SUPERFAMILY Histone-fold 36 95 IPR009072 GO:0046982
Sto8g2249 146 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 76 IPR003958 -
Sto8g2249 146 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 39 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2249 Sto-Chr8 14947472 14948928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2249 37 112 CCAAT-HAP5 Transcription Factor Family AT1G56170 43.421 6.33e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2249 K08066 - loa:LOAG_11522 73.1738