Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2248 atggaaaATGAAGGCAACACTTCTGATCAGCATGCAAGCCAAAACGTTTTGGGGGATTTTGGAAGCACAGATAACTTCAACCAGCAACCATTAACAGATTTCAGCAACATCATCAATCAACCTCCTTTCCAACAGGTTCCAGAGTTCATGACAATTCCACCTTATATGCTTGCTCAGTATTGTCAAGAAGAGCAAAAGGTTACCTATCTCGCTTTGTTCAAGTGGGACCGGTCACCTATGTCTTTTTCTCTCTTGGACAACAGTATAGTGTACAACAGTAAATCCATTTTAACAAAGCTAGGTCTTTCAATCTCTTCAACTCGCATGGGAGTCGATTTTGATGACTTGGAGATATTCGAAGAAAGTCGAGCTGTGCTCGAAAAAGCAACGGAGATCTTCATCGAAGAACTCAGCCTTCGTGCGTGGTATCGAACTGGAGAGAAGAACAAGAACACTATTGAGAGAAATGATTTTGCTGAAgaaattaatgaaaacaaaGTCTATGGCTTCTTAGCTGATATTGTTCCAATGGATCCCAATGACCATCCCTCTAACGTCAAGGAAGAACATTGTGGAATAATAATTGTTGAAGAAGTTACTAATTCTGCTGAGGAGGCCCCTGTGATGAATGTAGGCATTGTGAGTATCAATTAA 654 0.396 MENEGNTSDQHASQNVLGDFGSTDNFNQQPLTDFSNIINQPPFQQVPEFMTIPPYMLAQYCQEEQKVTYLALFKWDRSPMSFSLLDNSIVYNSKSILTKLGLSISSTRMGVDFDDLEIFEESRAVLEKATEIFIEELSLRAWYRTGEKNKNTIERNDFAEEINENKVYGFLADIVPMDPNDHPSNVKEEHCGIIIVEEVTNSAEEAPVMNVGIVSIN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2248 217 Gene3D Histone, subunit A 109 178 IPR009072 GO:0046982
Sto8g2248 217 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 119 186 - -
Sto8g2248 217 SUPERFAMILY Histone-fold 114 176 IPR009072 GO:0046982
Sto8g2248 217 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 119 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2248 Sto-Chr8 14942714 14946397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2248 100 193 CCAAT-HAP5 Transcription Factor Family AT1G56170 38.298 2.06e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2248 K08066 - spu:589551 64.3142